RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725		Q6ZPB1	254 aa	Predicted RBP	11.88	□□□□□ -0.51
SF1-206	ENST00000413725	FGD2	Q7Z6J4	655 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	VTCN1	Q7Z7D3	282 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	CD163	Q86VB7	1156 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	CHERP	Q8IWX8	916 aa	Known RBP	11.88	□□□□□ -0.51
SF1-206	ENST00000413725	MEIOB	Q8N635	442 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	LSMEM1	Q8N8F7	131 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	OR6T1	Q8NGN1	323 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	OR10Q1	Q8NGQ4	319 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.88	□□□□□ -0.51
SF1-206	ENST00000413725	DNAJA4	Q8WW22	397 aa	Predicted RBP	11.88	□□□□□ -0.51
SF1-206	ENST00000413725	POP5	Q969H6	163 aa	Known RBP	11.88	□□□□□ -0.51
SF1-206	ENST00000413725	ZNF524	Q96C55	264 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	HSH2D	Q96JZ2	352 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	NPAS1	Q99742	590 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	TNFRSF10D	Q9UBN6	386 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	CAMK2A	Q9UQM7	478 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	ZNF835	Q9Y2P0	537 aa		11.88	□□□□□ -0.51
SF1-206	ENST00000413725	TMED7-TICAM2	A0A0A6YYA0	188 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	FIGNL2	A6NMB9	653 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	TMEM229A	B2RXF0	380 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725		H0Y3Z8	333 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	SEC14L5	O43304	696 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	WDR1	O75083	606 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	IFNW1	P05000	195 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	GABRA1	P14867	456 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	CPN1	P15169	458 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	ZNF708	P17019	499 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	TNFRSF1B	P20333	461 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	ATP6V1B2	P21281	511 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	CXCR1	P25024	350 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	FKBP2	P26885	142 aa	Known RBP	11.87	□□□□□ -0.51
SF1-206	ENST00000413725	HTR2A	P28223	471 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	TACR3	P29371	465 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	OR1E2	P47887	323 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	STAR	P49675	285 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	LHX2	P50458	406 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	MAP2K6	P52564	334 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	OR1Q1	Q15612	314 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	ENTPD8	Q5MY95	495 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	DCST1	Q5T197	706 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	PDSS1	Q5T2R2	415 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	ZNF613	Q6PF04	617 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	ULK3	Q6PHR2	472 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	CYP2R1	Q6VVX0	501 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	DEF8	Q6ZN54	512 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	CHMP1B	Q7LBR1	199 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	LACC1	Q8IV20	430 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	UBQLNL	Q8IYU4	475 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	LILRA2	Q8N149	483 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	ATP6V1C2	Q8NEY4	427 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	OR4D11	Q8NGI4	311 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	OR5M9	Q8NGP3	310 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	WDYHV1	Q96HA8	205 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	WFDC6	Q9BQY6	131 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	POLR2J2	Q9GZM3	115 aa	Known RBP	11.87	□□□□□ -0.51
SF1-206	ENST00000413725	PRDM14	Q9GZV8	571 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	ADAM19	Q9H013	955 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	POLR2J3	Q9H1A7	115 aa	Known RBP	11.87	□□□□□ -0.51
SF1-206	ENST00000413725	TP63	Q9H3D4	680 aa	Predicted RBP	11.87	□□□□□ -0.51
SF1-206	ENST00000413725	TMEM185B	Q9H7F4	350 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	CTPS2	Q9NRF8	586 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	PNPLA3	Q9NST1	481 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	CHRNA9	Q9UGM1	479 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	OSGIN1	Q9UJX0	560 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	OSGIN2	Q9Y236	505 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	TMED7	Q9Y3B3	224 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725		V9GYQ6	96 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	MYO18B	Q8IUG5	2567 aa		11.87	□□□□□ -0.51
SF1-206	ENST00000413725	NCOA6	Q14686	2063 aa	Predicted RBP	11.87	□□□□□ -0.51
SF1-206	ENST00000413725	SPTBN1	Q01082	2364 aa	Known RBP	11.86	□□□□□ -0.51
SF1-206	ENST00000413725	TRGV8	A0A0C4DH27	118 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725		A0A1B0GWA3	101 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ELOA3D	A6NLF2	546 aa	Predicted RBP	11.86	□□□□□ -0.51
SF1-206	ENST00000413725	CPSF4L	A6NMK7	179 aa	Known RBP	11.86	□□□□□ -0.51
SF1-206	ENST00000413725	AHRR	A9YTQ3	701 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ZNHIT1	O43257	154 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	PRKD3	O94806	890 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	PNMT	P11086	282 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	GNLY	P22749	145 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	SLC7A1	P30825	629 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	IFNA8	P32881	189 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	SFTPD	P35247	375 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	PTGER4	P35408	488 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	CLDN18	P56856	261 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	TAS2R41	P59536	307 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	RPS3A	P61247	264 aa	Known RBP	11.86	□□□□□ -0.51
SF1-206	ENST00000413725	MS4A2	Q01362	244 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	SRY	Q05066	204 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	FLOT2	Q14254	428 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	NPTX1	Q15818	432 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	C3AR1	Q16581	482 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ELOA3B	Q3SY89	546 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	GXYLT1	Q4G148	440 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ALG10B	Q5I7T1	473 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	SWT1	Q5T5J6	900 aa	Known RBP	11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ZNF585A	Q6P3V2	769 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ESPNL	Q6ZVH7	1005 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	ASRGL1	Q7L266	308 aa		11.86	□□□□□ -0.51
SF1-206	ENST00000413725	YTHDF3	Q7Z739	585 aa	Known RBP	11.86	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms