RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 CALHM2Q9HA72 323 aa0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 SLC40A1Q9NP59 571 aa0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 NGBQ9NPG2 151 aa0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 CCL28Q9NRJ3 127 aa0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 WRAP73Q9P2S5 460 aaPredicted RBP0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 NRBP1Q9UHY1 535 aa0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 STX8Q9UNK0 236 aa0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 ASF1AQ9Y294 204 aa0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 SNX5Q9Y5X3 404 aa0.38□□□□□ -2.35
RNU2-55P-201ENST00000411146 IGLV11-55A0A075B6I3 123 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 VSTM2BA6NLU5 285 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 ZBTB14O43829 449 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 P04436 131 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 LINC00869P0C866 280 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 PNMA6AP0CW24 399 aaPredicted RBP0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 SCG2P13521 617 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 AREGP15514 252 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 SERPINA2P20848 420 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 ATP6V1B2P21281 511 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 EMDP50402 254 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 SNU13P55769 128 aaKnown RBP0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 RBP5P82980 135 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 GALK2Q01415 458 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 CCDC173Q0VFZ6 552 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 TYSND1Q2T9J0 566 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 TMEM255AQ5JRV8 349 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 C1orf100Q5SVJ3 147 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 ZNF679Q8IYX0 411 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 OR10G9Q8NGN4 311 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 OR56B4Q8NH76 319 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 RAET1EQ8TD07 263 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 DTX3LQ8TDB6 740 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 IL1F10Q8WWZ1 152 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 SLC25A36Q96CQ1 311 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 ASB9Q96DX5 294 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 CFAP36Q96G28 342 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 GAL3ST1Q99999 423 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 SIRPDQ9H106 197 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 DNTTIP1Q9H147 329 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 TRPV6Q9H1D0 765 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 SLC25A51Q9H1U9 297 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 CLMPQ9H6B4 373 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 AKIRIN1Q9H9L7 192 aaPredicted RBP0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 ZFP14Q9HCL3 533 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 SMPD3Q9NY59 655 aaPredicted RBP0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 MAD2L2Q9UI95 211 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 HEBP2Q9Y5Z4 205 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 CACNA1GO43497 2377 aa0.37□□□□□ -2.35
RNU2-55P-201ENST00000411146 IGLV3-12A0A075B6K2 115 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 IGHV3OR16-13A0A075B7E8 117 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 A0A1B0GVX0 72 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 A0A1B0GW55 424 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 PLAC8L1A1L4L8 177 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 PP2D1A8MPX8 630 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 RRP8O43159 456 aaKnown RBP0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 HCRTR1O43613 425 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 SRP72O76094 671 aaKnown RBP0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 GSTT2P0CG29 244 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 GSTT2BP0CG30 244 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DUX4L2P0CJ85 424 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DUX4L3P0CJ86 424 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DUX4L5P0CJ88 424 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DUX4L6P0CJ89 424 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DUX4L7P0CJ90 424 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 TDGF1P13385 188 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 RNH1P13489 461 aaKnown RBP0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 GCFC2P16383 781 aaKnown RBP0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 BDNFP23560 247 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 CXCR2P25025 360 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 SLC6A8P48029 635 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 TDGF1P3P51864 188 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 SLC10A7Q0GE19 358 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 SPP2Q13103 211 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 PPP2R5CQ13362 524 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 LAGE3Q14657 143 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 CHI3L2Q15782 390 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 VAX1Q5SQQ9 334 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 NCR3LG1Q68D85 454 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DUX4L9Q6RFH8 374 aaPredicted RBP0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 PAQR9Q6ZVX9 377 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 PRSS41Q7RTY9 318 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 GALNTL5Q7Z4T8 443 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 UBALD2Q8IYN6 164 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 OR8H3Q8N146 312 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 ZSCAN4Q8NAM6 433 aaPredicted RBP0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 SYT14Q8NB59 555 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 ST7LQ8TDW4 575 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 SLC5A11Q8WWX8 675 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DTD2Q96FN9 168 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 VMP1Q96GC9 406 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 ELMO2Q96JJ3 720 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 FCRL1Q96LA6 429 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 BMFQ96LC9 184 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 ZMAT2Q96NC0 199 aaKnown RBP0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 ALDH8A1Q9H2A2 487 aaPredicted RBP0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 RHOJQ9H4E5 214 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DUX4Q9UBX2 424 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 FBXW2Q9UKT8 454 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 MAD1L1Q9Y6D9 718 aa0.36□□□□□ -2.35
RNU2-55P-201ENST00000411146 DHX29Q7Z478 1369 aaKnown RBP0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms