RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 FKBP10Q96AY3 582 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 TECTBQ96PL2 329 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC2A8Q9NY64 477 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 SERTM2A0A1B0GWG4 89 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 FUOMA2VDF0 154 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 C1orf196B1AJZ1 125 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 SUSD5O60279 629 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 ADAM23O75077 832 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 RFPL1O75677 317 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 F11P03951 625 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 FADDQ13158 208 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 LRRC42Q9Y546 428 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 IER3IP1Q9Y5U9 82 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 TGM6O95932 706 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC35E2BP0CK96 405 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 NCS1P62166 190 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 ERVK-25P63136 954 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 BAXQ07812 192 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 TP53I3Q53FA7 332 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 OR1J2Q8NGS2 313 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 INTS12Q96CB8 462 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 UBL7Q96S82 380 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 NPY6RQ99463 290 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 SPIN2AQ99865 258 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 SPIN2BQ9BPZ2 258 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 VN1R3Q9BXE9 311 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 SCN9AQ15858 1988 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 TRAF3IP2O43734 574 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 GYPBP06028 91 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 EN2P19622 333 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 INHBCP55103 352 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 METTL25Q8N6Q8 603 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 TCTN2Q96GX1 697 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 PSAT1Q9Y617 370 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 TRAV27A0A087WT01 109 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 CT45A6P0DMU7 189 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 CT45A5P0DMU8 189 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 CT45A7P0DMV0 189 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 CT45A8P0DMV1 189 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 CT45A9P0DMV2 189 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 APEHP13798 732 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 PVRP15151 417 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 HNRNPFP52597 415 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 SNTB2Q13425 540 aaKnown RBP10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 CT45A2Q5DJT8 189 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 CT45A1Q5HYN5 189 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 ZNF704Q6ZNC4 412 aaPredicted RBP10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 AGBL5Q8NDL9 886 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 CT45A3Q8NHU0 189 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 ZNF576Q9H609 170 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 ZDHHC18Q9NUE0 388 aa10.54□□□□□ -0.72
PRPF40A-202ENST00000410080 BTAF1O14981 1849 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 RNF212BA8MTL3 300 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 HS3ST1O14792 307 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 MAOAP21397 527 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 HOXD13P35453 343 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 THBS3P49746 956 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 NADK2Q4G0N4 442 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 CLECL1Q8IZS7 167 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 TMEM185AQ8NFB2 350 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 INTS14Q96SY0 518 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 NKX3-1Q99801 234 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 TAS2R8Q9NYW2 309 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 EHFQ9NZC4 300 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC35A3Q9Y2D2 325 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 ZNF705GA8MUZ8 300 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 SEC14L6B5MCN3 397 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 M0R3H8 397 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 TK1P04183 234 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 TMEM176BQ3YBM2 270 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 SLC36A2Q495M3 483 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 OGFOD3Q6PK18 319 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 ZFAND4Q86XD8 727 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 OR5AS1Q8N127 324 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 TMEM178AQ8NBL3 297 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 SORBS1Q9BX66 1292 aaKnown RBP10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 PRDM9Q9NQV7 894 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 TRAPPC13A5PLN9 417 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 F8W036 122 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 FANCGO15287 622 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 IGHV3-9P01782 118 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 OR8U8P0C7N1 319 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 CHATP28329 748 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 BLOC1S1P78537 153 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 RNLSQ5VYX0 342 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 SYT13Q7L8C5 426 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 GTPBP8Q8N3Z3 284 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 MYLIPQ8WY64 445 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 SMOXQ9NWM0 555 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 CSNK1G3Q9Y6M4 447 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 C12orf71A8MTZ7 269 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 ZNF736B4DX44 427 aaPredicted RBP10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 PRRG2O14669 202 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 EMP3P54852 163 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 GAB1Q13480 694 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 ZBED5Q49AG3 693 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 GDE1Q9NZC3 331 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 KIAA0513O60268 411 aa10.53□□□□□ -0.72
PRPF40A-202ENST00000410080 RPA2P15927 270 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms