RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ZNF136P52737 540 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 TPD52P55327 224 aaPredicted RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 CARD18P57730 90 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 NCALDP61601 193 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 CTU2Q2VPK5 515 aaKnown RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 TMEM176BQ3YBM2 270 aaPredicted RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 GTF2IRD2BQ6EKJ0 949 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 DHRS4L2Q6PKH6 230 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 PATL1Q86TB9 770 aaKnown RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 GTF2IRD2Q86UP8 949 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 ARMC8Q8IUR7 673 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 C10orf111Q8N326 155 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 POU5F2Q8N7G0 328 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 NAXEQ8NCW5 288 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 ATP6V1C2Q8NEY4 427 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 RASSF5Q8WWW0 418 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 CPNE4Q96A23 557 aaPredicted RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 INTS12Q96CB8 462 aaKnown RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF845Q96IR2 970 aaPredicted RBP9.8□□□□□ -0.84
CHMP3-205ENST00000409810 ADGRG7Q96K78 797 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 SLC39A3Q9BRY0 314 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 TRIM8Q9BZR9 551 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 MYLK2Q9H1R3 596 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 EFCAB1Q9HAE3 211 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 KLHL28Q9NXS3 571 aa9.8□□□□□ -0.84
CHMP3-205ENST00000409810 A0A0J9YW62 118 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 FAM220BPB1ANY3 271 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 FXYD1O00168 92 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 NDUFAB1O14561 156 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 AP3D1O14617 1153 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 AIM2O14862 343 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 CXCL13O43927 109 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 TGM6O95932 706 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 PLGP00747 810 aaPredicted RBP9.79□□□□□ -0.84
CHMP3-205ENST00000409810 OPN1LWP04000 364 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 GKN3PP0CG01 181 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 TFPIP10646 304 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 IL11P20809 199 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 AQP1P29972 269 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 PEX19P40855 299 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 SLC1A3P43003 542 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 CLK1P49759 484 aaKnown RBP9.79□□□□□ -0.84
CHMP3-205ENST00000409810 ASCL1P50553 236 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 PCBP3P57721 371 aaKnown RBP9.79□□□□□ -0.84
CHMP3-205ENST00000409810 CSNK2A1P68400 391 aaPredicted RBP9.79□□□□□ -0.84
CHMP3-205ENST00000409810 PLAURQ03405 335 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 CDSNQ15517 529 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 ADRM1Q16186 407 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 VMACQ2NL98 169 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 SYT14P1Q58G82 188 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 WBP2NLQ6ICG8 309 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 POMZP3Q6PJE2 187 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 HACD2Q6Y1H2 254 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 PIGWQ7Z7B1 504 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 PTOV1Q86YD1 416 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 MCEMP1Q8IX19 187 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 ZZZ3Q8IYH5 903 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 CLIP4Q8N3C7 705 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 FNDC9Q8TBE3 224 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 SLC26A7Q8TE54 656 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 FIG4Q92562 907 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 OSTF1Q92882 214 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 DDIT4LQ96D03 193 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 ZHX1-C8orf76Q96EF9 292 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 LRRC37BQ96QE4 947 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 OR5B2Q96R09 309 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 HOPXQ9BPY8 73 aaPredicted RBP9.79□□□□□ -0.84
CHMP3-205ENST00000409810 UCK2Q9BZX2 261 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 PIGMQ9H3S5 423 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 CTPS2Q9NRF8 586 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 GLRX2Q9NS18 164 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 RLIMQ9NVW2 624 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 FOXD3Q9UJU5 478 aaPredicted RBP9.79□□□□□ -0.84
CHMP3-205ENST00000409810 HDGFL3Q9Y3E1 203 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 ADGRG4Q8IZF6 3080 aa9.79□□□□□ -0.84
CHMP3-205ENST00000409810 TMED7-TICAM2A0A0A6YYA0 188 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 NKX2-6A6NCS4 301 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 EEF1E1-BLOC1S5C9J1V9 151 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 EEF1E1O43324 174 aaKnown RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF208O43345 1280 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 HNRNPRO43390 633 aaKnown RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 EFNA2O43921 213 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 ADAM11O75078 769 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 FAM107AO95990 144 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 IFNA14P01570 189 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 COX6B1P14854 86 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 CXCR1P25024 350 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 SHC1P29353 583 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 TACR3P29371 465 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 CPA2P48052 419 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 NUDT2P50583 147 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 CTBP2P56545 445 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 RGS8P57771 180 aaPredicted RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 RAC3P60763 192 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 RNPS1Q15287 305 aaKnown RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 ZNF239Q16600 458 aaKnown RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 RABL3Q5HYI8 236 aa9.78□□□□□ -0.84
CHMP3-205ENST00000409810 GKAP1Q5VSY0 366 aaPredicted RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 SP5Q6BEB4 398 aaPredicted RBP9.78□□□□□ -0.84
CHMP3-205ENST00000409810 TREML1Q86YW5 311 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms