RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 IL1AP01583 271 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 FBLP22087 321 aaKnown RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 TGM1P22735 817 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 SLC6A6P31641 620 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 COPZ1P61923 177 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 ELAVL1Q15717 326 aaKnown RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 FCRLBQ6BAA4 426 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 ZNF322Q6U7Q0 402 aaPredicted RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 SLITRK4Q8IW52 837 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 ACBD7Q8N6N7 88 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 ZFP41Q8N8Y5 198 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 MINDY2Q8NBR6 621 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 SPRYD4Q8WW59 207 aaPredicted RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 ADIPOR1Q96A54 375 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 TEAD3Q99594 435 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 MKKSQ9NPJ1 570 aaPredicted RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 TOR4AQ9NXH8 423 aa18.47■□□□□ 0.55
USP39-204ENST00000409766 COL5A1P20908 1838 aaPredicted RBP18.47■□□□□ 0.55
USP39-204ENST00000409766 AKAP8O43823 692 aaKnown RBP18.46■□□□□ 0.55
USP39-204ENST00000409766 CDRT1O95170 752 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 NOS3P29474 1203 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 ARRB1P49407 418 aaPredicted RBP18.46■□□□□ 0.55
USP39-204ENST00000409766 FABP5Q01469 135 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 DBPQ10586 325 aaPredicted RBP18.46■□□□□ 0.55
USP39-204ENST00000409766 CD226Q15762 336 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 VWA2Q5GFL6 755 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 UBALD2Q8IYN6 164 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 ZNF527Q8NB42 609 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 SLC25A46Q96AG3 418 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 C3orf49Q96BT1 292 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 ZNF501Q96CX3 271 aaPredicted RBP18.46■□□□□ 0.55
USP39-204ENST00000409766 LCORQ96JN0 433 aaPredicted RBP18.46■□□□□ 0.55
USP39-204ENST00000409766 NUDT22Q9BRQ3 303 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 RERGLQ9H628 205 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 SMURF1Q9HCE7 757 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 UGT2A1Q9Y4X1 527 aa18.46■□□□□ 0.55
USP39-204ENST00000409766 FUOMA2VDF0 154 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 CCDC182A6NF36 153 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 FRG2CA6NGY1 282 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 SLC22A31A6NKX4 558 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 C12orf71A8MTZ7 269 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 HK1P19367 917 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 SLC2A5P22732 501 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 FGF9P31371 208 aaPredicted RBP18.45■□□□□ 0.54
USP39-204ENST00000409766 CSTF1Q05048 431 aaKnown RBP18.45■□□□□ 0.54
USP39-204ENST00000409766 CRMP1Q14194 572 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 ZNF181Q2M3W8 571 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 CRTC2Q53ET0 693 aaPredicted RBP18.45■□□□□ 0.54
USP39-204ENST00000409766 KLHL12Q53G59 568 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 TSSK4Q6SA08 328 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 PLEKHG7Q6ZR37 379 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 LYSMD2Q8IV50 215 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 SGTBQ96EQ0 304 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 KCTD7Q96MP8 289 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 TIMP4Q99727 224 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 ZNF768Q9H5H4 540 aaKnown RBP18.45■□□□□ 0.54
USP39-204ENST00000409766 FGF21Q9NSA1 209 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 CAB39Q9Y376 341 aaPredicted RBP18.45■□□□□ 0.54
USP39-204ENST00000409766 A0A1B0GX78 115 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 ZNF3P17036 446 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 SPANXN2Q5MJ10 180 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 APOOLQ6UXV4 268 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 GATSQ8NAP1 163 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 CCDC74AQ96AQ1 378 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 MED18Q9BUE0 208 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 TPK1Q9H3S4 243 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 ABCB10Q9NRK6 738 aa18.45■□□□□ 0.54
USP39-204ENST00000409766 ISPDA4D126 451 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 TBX1O43435 398 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 OIP5O43482 229 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 UTS2O95399 124 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 HPGDP15428 266 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 SLC9A3P48764 834 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 TGM4P49221 684 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 MXD1Q05195 221 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 SKP2Q13309 424 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 NSDHLQ15738 373 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 C1orf189Q5VU69 101 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 YOD1Q5VVQ6 348 aaPredicted RBP18.44■□□□□ 0.54
USP39-204ENST00000409766 ARHGAP11AQ6P4F7 1023 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 LRRC17Q8N6Y2 441 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 TMEM99Q8N816 258 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 CYB561A3Q8NBI2 242 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 C7orf57Q8NEG2 295 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 SNRNP27Q8WVK2 155 aaKnown RBP18.44■□□□□ 0.54
USP39-204ENST00000409766 DPYSL5Q9BPU6 564 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 NUDT9Q9BW91 350 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 OR51V1Q9H2C8 321 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 ISG20L2Q9H9L3 353 aaKnown RBP18.44■□□□□ 0.54
USP39-204ENST00000409766 CHRNA9Q9UGM1 479 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 IQCMA0A1B0GVH7 501 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 TRDV1A0A1B0GX56 115 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 C19orf67A6NJJ6 358 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 SCDO00767 359 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 NDUFB2O95178 105 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 CLUP10909 449 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 UBL4AP11441 157 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 CELP19835 753 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 TNFSF8P32971 234 aa18.44■□□□□ 0.54
USP39-204ENST00000409766 BCAP31P51572 246 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms