RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 TEX37Q96LM6 180 aa12.96□□□□□ -0.33
NIF3L1-205ENST00000409588 TMEM45AQ9NWC5 275 aa12.96□□□□□ -0.33
NIF3L1-205ENST00000409588 TRAPPC4Q9Y296 219 aa12.96□□□□□ -0.33
NIF3L1-205ENST00000409588 HDGFL3Q9Y3E1 203 aa12.96□□□□□ -0.33
NIF3L1-205ENST00000409588 HRNRQ86YZ3 2850 aaPredicted RBP12.96□□□□□ -0.34
NIF3L1-205ENST00000409588 GOLGA8QA0A0J9YX86 632 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 GOLGA8OA6NCC3 632 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 AGAP5A6NIR3 686 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 GOLGA8NF8WBI6 632 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 FAAHO00519 579 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 CYTIPO60759 359 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 H6PDO95479 791 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 DBIP07108 87 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 KITP10721 976 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 CD53P19397 219 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 IL12AP29459 219 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 MERTKQ12866 999 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 MAPK14Q16539 360 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 ACKR1Q16570 336 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 SHEQ5VZ18 495 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 PLEKHM3Q6ZWE6 761 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 MTDHQ86UE4 582 aaKnown RBP12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 RNF130Q86XS8 419 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 TUSC5Q8IXB3 177 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 ZNF440Q8IYI8 595 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 HSD17B8Q92506 261 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 ZHX1-C8orf76Q96EF9 292 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 PIK3IP1Q96FE7 263 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 ITCHQ96J02 903 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 MARK4Q96L34 752 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 ARMC7Q9H6L4 198 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 COQ10BQ9H8M1 238 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 C6orf203Q9P0P8 240 aaPredicted RBP12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 CLEC4AQ9UMR7 237 aa12.95□□□□□ -0.34
NIF3L1-205ENST00000409588 TMEM247A6NEH6 219 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 SULT2B1O00204 365 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 ZNF208O43345 1280 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 ANP32DO95626 131 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 PMS2P2O95744 297 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 NR2F1P10589 423 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 IL7RP16871 459 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 KLK2P20151 261 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 SHC1P29353 583 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 CCKARP32238 428 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 MRPL19P49406 292 aaKnown RBP12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 NME5P56597 212 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 CHRNEQ04844 493 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 RASGEF1BQ0VAM2 473 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 POU4F3Q15319 338 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 NDUFAF6Q330K2 333 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 SYT14P1Q58G82 188 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 SFRP5Q5T4F7 317 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 PEX5LQ8IYB4 626 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 GABRG1Q8N1C3 465 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 MIER2Q8N344 545 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 ATP6V1C2Q8NEY4 427 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 ABHD3Q8WU67 409 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 ZG16BQ96DA0 208 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 C7orf26Q96N11 449 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 OR5B2Q96R09 309 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 KLHDC3Q9BQ90 382 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 CCDC106Q9BWC9 280 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 SRXN1Q9BYN0 137 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 RAD21L1Q9H4I0 556 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 EMC3Q9P0I2 261 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 CHRNA9Q9UGM1 479 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 ZNF232Q9UNY5 417 aa12.94□□□□□ -0.34
NIF3L1-205ENST00000409588 MED13LQ71F56 2210 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 AKAP6Q13023 2319 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 GPR171O14626 319 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 KLF4O43474 513 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 EIF1BO60739 113 aaKnown RBP12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 HOXC12P31275 282 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 SLC1A3P43003 542 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 OR3A2P47893 321 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 DIO1P49895 249 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 POLR2JP52435 117 aaKnown RBP12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 CASP9P55211 416 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 ADAM8P78325 824 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 FUT5Q11128 374 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 ITGADQ13349 1161 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 C1QTNF12Q5T7M4 302 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 EPGNQ6UW88 154 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 PRSS57Q6UWY2 283 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 TFAP2EQ6VUC0 442 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 Q6ZT83 130 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 GALNT5Q7Z7M9 940 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 P2RY8Q86VZ1 359 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 ACTR6Q9GZN1 396 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 SLC38A1Q9H2H9 487 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 C12orf49Q9H741 205 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 P2RX2Q9UBL9 471 aa12.93□□□□□ -0.34
NIF3L1-205ENST00000409588 IGKV3D-15A0A087WSY6 115 aa12.92□□□□□ -0.34
NIF3L1-205ENST00000409588 A0A0G2JPF8 293 aa12.92□□□□□ -0.34
NIF3L1-205ENST00000409588 A0A1W2PNR3 127 aa12.92□□□□□ -0.34
NIF3L1-205ENST00000409588 FAM234BA2RU67 622 aa12.92□□□□□ -0.34
NIF3L1-205ENST00000409588 PRAMEF27A3QJZ7 478 aa12.92□□□□□ -0.34
NIF3L1-205ENST00000409588 HNRNPCL2B2RXH8 293 aa12.92□□□□□ -0.34
NIF3L1-205ENST00000409588 HNRNPCL3B7ZW38 293 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms