RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 EFCAB9A8MZ26 197 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 PTGES3LE9PB15 166 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 PRKYO43930 277 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 ZNF292O60281 2723 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 WISP1O95388 367 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 NUDT14O95848 222 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 SAGP10523 405 aaPredicted RBP12.81□□□□□ -0.36
GPNMB-203ENST00000409458 PNMTP11086 282 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 PGCP20142 388 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 TACR3P29371 465 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 NUDT6P53370 316 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 NR1H2P55055 460 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 ELOA3BQ3SY89 546 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 NADK2Q4G0N4 442 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 FOXB2Q5VYV0 432 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 OR5M10Q6IEU7 315 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 SLC30A6Q6NXT4 461 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 SLC27A4Q6P1M0 643 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 CDK20Q8IZL9 346 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 ELOA3Q8NG57 546 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 BRIX1Q8TDN6 353 aaKnown RBP12.81□□□□□ -0.36
GPNMB-203ENST00000409458 GPR119Q8TDV5 335 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 OSTF1Q92882 214 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 SAMD8Q96LT4 415 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 CCNL2Q96S94 520 aaPredicted RBP12.81□□□□□ -0.36
GPNMB-203ENST00000409458 TSSK6Q9BXA6 273 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 ADAM19Q9H013 955 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 OR52D1Q9H346 318 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 CDCP1Q9H5V8 836 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 PCNX3Q9H6A9 2034 aa12.81□□□□□ -0.36
GPNMB-203ENST00000409458 TRAV27A0A087WT01 109 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 CDRT15L2A8MXV6 281 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 MPZL2O60487 215 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 CEACAM1P13688 526 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ALDH3B2P48448 385 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 PCYT1AP49585 367 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 MLF1P58340 268 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SNRPGP62308 76 aaKnown RBP12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SLC35A2P78381 396 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 CHAF1BQ13112 559 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ATP1A4Q13733 1029 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 QPRTQ15274 297 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 TCEANCQ8N8B7 351 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 NKD1Q969G9 470 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 NACC2Q96BF6 587 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SGTBQ96EQ0 304 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 METTL7AQ9H8H3 244 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 C12orf10Q9HB07 376 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SCN3BQ9NY72 215 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ERVK-18Q9QC07 812 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 IL17BQ9UHF5 180 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SIGLEC7Q9Y286 467 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 YARS2Q9Y2Z4 477 aaKnown RBP12.8□□□□□ -0.36
GPNMB-203ENST00000409458 TPRKBQ9Y3C4 175 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 CHCHD2Q9Y6H1 151 aaPredicted RBP12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ANKUB1A6NFN9 424 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 CDC40O60508 579 aaKnown RBP eCLIP12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SSR4P51571 173 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 MLLT10P55197 1068 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 C17orf67Q0P5P2 114 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 FHL1Q13642 323 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 PGGHGQ32M88 737 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 IL20RBQ6UXL0 311 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 THSD4Q6ZMP0 1018 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 KCTD8Q6ZWB6 473 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SLC46A3Q7Z3Q1 461 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 RPS19BP1Q86WX3 136 aaKnown RBP12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SPARTQ8N0X7 666 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ARMC10Q8N2F6 343 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ZNF540Q8NDQ6 660 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 OR8J1Q8NGP2 316 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ADAMTS17Q8TE56 1095 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ASB15Q8WXK1 588 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 FGF11Q92914 225 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 TMEM43Q9BTV4 400 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 POLDIP3Q9BY77 421 aaKnown RBP12.8□□□□□ -0.36
GPNMB-203ENST00000409458 SLC19A3Q9BZV2 496 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 ENKD1Q9H0I2 346 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 DUSP21Q9H596 190 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 AMBNQ9NP70 447 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 PLCXD1Q9NUJ7 323 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 TAS2R10Q9NYW0 307 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 DNAJC27Q9NZQ0 273 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 OSGIN1Q9UJX0 560 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 WIF1Q9Y5W5 379 aa12.8□□□□□ -0.36
GPNMB-203ENST00000409458 KNTC1P50748 2209 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 FREM2Q5SZK8 3169 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.79□□□□□ -0.36
GPNMB-203ENST00000409458 ENTPD6O75354 484 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 CH25HO95992 272 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 GP1BBP13224 206 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 ICAM2P13598 275 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 CD82P27701 267 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 RBMS1P29558 406 aaKnown RBP12.79□□□□□ -0.36
GPNMB-203ENST00000409458 CASP3P42574 277 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 CSNK2BP67870 215 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 EGR4Q05215 589 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 SNAPC1Q16533 368 aa12.79□□□□□ -0.36
GPNMB-203ENST00000409458 TMEM201Q5SNT2 666 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms