RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 IGHG3P01860 377 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 HRGP04196 525 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 IL3P08700 152 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 PSKH1P11801 424 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 ATP5F1P24539 256 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 YAP1P46937 504 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 ALDH9A1P49189 494 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 SMSP52788 366 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 FUT7Q11130 342 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 BIKQ13323 160 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 CAPRIN1Q14444 709 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 NTRK2Q16620 822 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 C21orf62-AS1Q17RA5 79 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 PRICKLE4Q2TBC4 344 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 ATAD3CQ5T2N8 411 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 LGSNQ5TDP6 509 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 RTL6Q6ICC9 239 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 KRT80Q6KB66 452 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 C3orf33Q6P1S2 294 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 ZFP1Q6P2D0 407 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 GK5Q6ZS86 529 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 TRILQ7L0X0 811 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 PAGE2Q7Z2X7 111 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 SLC22A16Q86VW1 577 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 CCDC71Q8IV32 467 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 SLC34A3Q8N130 599 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 PQLC1Q8N2U9 271 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 FBXW8Q8N3Y1 598 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 CHTF18Q8WVB6 975 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 GTF3AQ92664 365 aaKnown RBP8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 L3HYPDHQ96EM0 354 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 JSRP1Q96MG2 331 aaPredicted RBP8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 ZNF681Q96N22 645 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 UCK2Q9BZX2 261 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 BRF2Q9HAW0 419 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 UFSP2Q9NUQ7 469 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 VPS29Q9UBQ0 182 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 ZNF229Q9UJW7 825 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 COPS3Q9UNS2 423 aa8.84□□□□□ -0.99
NIF3L1-202ENST00000409020 NKX2-6A6NCS4 301 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 OR6C76A6NM76 312 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 ACOT7O00154 380 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 HTR3BO95264 441 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 CBX7O95931 251 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 PROCP04070 461 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 AGAP20933 346 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 GPX3P22352 226 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 GALNSP34059 522 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 KRTAP10-9P60411 292 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 SPCS3P61009 180 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 PMPCAQ10713 525 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 LCP2Q13094 533 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 HYAL4Q2M3T9 481 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 GXYLT1Q4G148 440 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 TRMT12Q53H54 448 aaKnown RBP8.83□□□□□ -1
NIF3L1-202ENST00000409020 FGD3Q5JSP0 725 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 PDSS1Q5T2R2 415 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 FNDC7Q5VTL7 733 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 SLC22A10Q63ZE4 541 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 ZNF585AQ6P3V2 769 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 CREB3L2Q70SY1 520 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 ZNF295-AS1Q8N0V1 137 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 PARP8Q8N3A8 854 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.83□□□□□ -1
NIF3L1-202ENST00000409020 OR52H1Q8NGJ2 320 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 PHF10Q8WUB8 498 aaKnown RBP8.83□□□□□ -1
NIF3L1-202ENST00000409020 GTF2H4Q92759 462 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 OSBPL11Q9BXB4 747 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 ITPAQ9BY32 194 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 TINAGL1Q9GZM7 467 aaPredicted RBP8.83□□□□□ -1
NIF3L1-202ENST00000409020 NXF5Q9H1B4 397 aaKnown RBP8.83□□□□□ -1
NIF3L1-202ENST00000409020 ZFP64Q9NPA5 681 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 BRD7Q9NPI1 651 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 DDX28Q9NUL7 540 aaKnown RBP8.83□□□□□ -1
NIF3L1-202ENST00000409020 AHSPQ9NZD4 102 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 CD300AQ9UGN4 299 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 TAGLN3Q9UI15 199 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 PSME2Q9UL46 239 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 RNF6Q9Y252 685 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 PLLPQ9Y342 182 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 FAM215AQ9Y5M1 114 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 PTGDR2Q9Y5Y4 395 aa8.83□□□□□ -1
NIF3L1-202ENST00000409020 ANKRD17O75179 2603 aaKnown RBP8.83□□□□□ -1
NIF3L1-202ENST00000409020 A0A1B0GVC2 190 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 C1orf226A1L170 272 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 FAM90A27PA6NNH2 459 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 PCDH7O60245 1069 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 TRIM3O75382 744 aaPredicted RBP8.82□□□□□ -1
NIF3L1-202ENST00000409020 ULK1O75385 1050 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 TGM6O95932 706 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 ATP1B1P05026 303 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 RAB4AP20338 218 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 CD247P20963 164 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 ABCD3P28288 659 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 UQCRC1P31930 480 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 CCNIQ14094 377 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 MPP2Q14168 576 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 ZNF273Q14593 569 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 RPS6KA2Q15349 733 aa8.82□□□□□ -1
NIF3L1-202ENST00000409020 ZNF181Q2M3W8 571 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms