RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 KISS1RQ969F8 398 aaPredicted RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 DDIT4LQ96D03 193 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 ZC3HAV1LQ96H79 300 aaKnown RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 MAELQ96JY0 434 aaKnown RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 OR5B2Q96R09 309 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 TMUB1Q9BVT8 246 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 POTEKPQ9BYX7 375 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 ACTR6Q9GZN1 396 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 LIME1Q9H400 295 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 WDR55Q9H6Y2 383 aaPredicted RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 C12orf49Q9H741 205 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 MTHFD2LQ9H903 347 aaPredicted RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 BCO1Q9HAY6 547 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 SDR39U1Q9NRG7 319 aaPredicted RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 ARGLU1Q9NWB6 273 aaPredicted RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 CHRNA9Q9UGM1 479 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 PCNX3Q9H6A9 2034 aa8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 PRRC2AP48634 2157 aaKnown RBP8.1□□□□□ -1.11
SNORD88A-201ENST00000408314 A0A1W2PNR3 127 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 FAM234BA2RU67 622 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 AGAP5A6NIR3 686 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 FAM171A2A8MVW0 826 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 FAAHO00519 579 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 EIF1BO60739 113 aaKnown RBP8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 CYTIPO60759 359 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 DIAPH2O60879 1101 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 TGDSO95455 350 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 PMS2P2O95744 297 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 NID1P14543 1247 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 CD53P19397 219 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 PPIBP23284 216 aaKnown RBP8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 SHC1P29353 583 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 RYKP34925 604 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 DIO1P49895 249 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 RNF144AP50876 292 aaPredicted RBP8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 COPZ1P61923 177 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 PHC1P78364 1004 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 CHRNEQ04844 493 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 RASGEF1BQ0VAM2 473 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 LARS2Q15031 903 aaKnown RBP8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 PDK3Q15120 406 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 ACKR1Q16570 336 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 C6orf10Q5SRN2 563 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF704Q6ZNC4 412 aaPredicted RBP8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 TMPPEQ6ZT21 453 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF550Q7Z398 422 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 WFDC8Q8IUA0 241 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 TUSC5Q8IXB3 177 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 ZNF100Q8IYN0 542 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 GABRG1Q8N1C3 465 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 NUDT8Q8WV74 236 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 DYDC1Q8WWB3 177 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 HSD17B8Q92506 261 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 C7orf26Q96N11 449 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 CCL19Q99731 98 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 NPAS1Q99742 590 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 PSD2Q9BQI7 771 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 SRXN1Q9BYN0 137 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 ESRP2Q9H6T0 727 aaKnown RBP8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 UBTD1Q9HAC8 227 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 TMEM45AQ9NWC5 275 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 KCNE5Q9UJ90 142 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 MTORP42345 2549 aa8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 HRNRQ86YZ3 2850 aaPredicted RBP8.09□□□□□ -1.11
SNORD88A-201ENST00000408314 A0A096LPI6 279 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 CFAP73A6NFT4 308 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 SMAD9O15198 467 aaKnown RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 ZNF208O43345 1280 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 EFNA2O43921 213 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 RPS4Y1P22090 263 aaKnown RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC1A3P43003 542 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 CRATP43155 626 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 OR3A2P47893 321 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 MRPL19P49406 292 aaKnown RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 POLR2HP52434 150 aaKnown RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 POLR2JP52435 117 aaKnown RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 CASP9P55211 416 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 DSTNP60981 165 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC35A1P78382 337 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 NKX6-1P78426 367 aaPredicted RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 FUT5Q11128 374 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 FADDQ13158 208 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 ITGADQ13349 1161 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 SFRP5Q5T4F7 317 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 C1QTNF12Q5T7M4 302 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 PRAMEF8Q5VWM4 474 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 PRAMEF7Q5VXH5 474 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 ANKRD34AQ69YU3 496 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 ABLIM2Q6H8Q1 611 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 Q6ZT83 130 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 MTDHQ86UE4 582 aaKnown RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 P2RY8Q86VZ1 359 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 CXorf67Q86X51 503 aaPredicted RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 TMEM171Q8WVE6 324 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 ZNF75CPQ92670 426 aaPredicted RBP8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 SLC35B4Q969S0 331 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 MUCL1Q96DR8 90 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 TEX37Q96LM6 180 aa8.08□□□□□ -1.12
SNORD88A-201ENST00000408314 NAA11Q9BSU3 229 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms