RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 NAA11Q9BSU3 229 aaPredicted RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 MAGEH1Q9H213 219 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 BRF2Q9HAW0 419 aa11.87□□□□□ -0.51
HERC3-203ENST00000407637 H2AFY2Q9P0M6 372 aaPredicted RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 MBD1Q9UIS9 605 aaPredicted RBP11.87□□□□□ -0.51
HERC3-203ENST00000407637 A0A0D9SG52 128 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 DAPL1A0PJW8 107 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 METTL21EPA6NDL7 271 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 BCL2L11O43521 198 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 PLPP2O43688 288 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 C8GP07360 202 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 APEHP13798 732 aaKnown RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 STXBP1P61764 594 aaKnown RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 CXCL9Q07325 125 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 PDE7AQ13946 482 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 C10orf120Q5SQS8 335 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 DNAJB7Q7Z6W7 309 aaPredicted RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 PAQR8Q8TEZ7 354 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 C14orf144Q96I85 54 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 CNTNAP3BQ96NU0 1288 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 VRK1Q99986 396 aaPredicted RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 RSRP1Q9BUV0 290 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 GGACTQ9BVM4 153 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 POLE3Q9NRF9 147 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 MARCH2Q9P0N8 246 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 DNAJC25-GNG10A0A024R161 153 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 TRBV5-4A0A0C4DH59 114 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 DBX1A6NMT0 343 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 ZNF705EA8MWA4 302 aaPredicted RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 F5H5T6 163 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 H0YIV9 168 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 PHYHO14832 338 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 SMAD9O15198 467 aaKnown RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 KDELR3O43731 214 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 FADS1O60427 444 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 B3GAT3O94766 335 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 ANXA2P07355 339 aaKnown RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 UQCRC2P22695 453 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 HSD3B2P26439 372 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 ATXN7L3Q14CW9 347 aaPredicted RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 PON3Q15166 354 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 ETV3LQ6ZN32 361 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 SLC29A4Q7RTT9 530 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 SAMD7Q7Z3H4 446 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 NUDT13Q86X67 352 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 NXPE1Q8N323 547 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 KCNRGQ8N5I3 272 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 C16orf78Q8WTQ4 265 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 SLC25A38Q96DW6 304 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 JAM3Q9BX67 310 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 TCF7L1Q9HCS4 588 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 ZMIZ1Q9ULJ6 1067 aa11.86□□□□□ -0.51
HERC3-203ENST00000407637 ZFP37Q9Y6Q3 630 aaPredicted RBP11.86□□□□□ -0.51
HERC3-203ENST00000407637 FRMPD3Q5JV73 1810 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 UGDHO60701 494 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 REM1O75628 298 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 CNMDO75829 334 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 MRPL3P09001 348 aaKnown RBP11.85□□□□□ -0.51
HERC3-203ENST00000407637 PTNP21246 168 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 LAP3P28838 519 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 P2RX1P51575 399 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 RPS24P62847 133 aaKnown RBP11.85□□□□□ -0.51
HERC3-203ENST00000407637 RELQ04864 619 aaPredicted RBP11.85□□□□□ -0.51
HERC3-203ENST00000407637 SKP2Q13309 424 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 TMEM44Q2T9K0 475 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 PGGHGQ32M88 737 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 CDPF1Q6NVV7 123 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 FAM199XQ6PEV8 388 aaPredicted RBP11.85□□□□□ -0.51
HERC3-203ENST00000407637 LINC00471Q8N535 108 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 OR4A4PQ8NGN8 299 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 OR5J2Q8NH18 312 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 TCTEX1D2Q8WW35 142 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 HIST1H2BAQ96A08 127 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 TRIM43Q96BQ3 446 aaPredicted RBP11.85□□□□□ -0.51
HERC3-203ENST00000407637 MEGF10Q96KG7 1140 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 EDEM2Q9BV94 578 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 SEC11CQ9BY50 192 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 C8orf33Q9H7E9 229 aaPredicted RBP11.85□□□□□ -0.51
HERC3-203ENST00000407637 ZFYVE1Q9HBF4 777 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 MEPEQ9NQ76 525 aaPredicted RBP11.85□□□□□ -0.51
HERC3-203ENST00000407637 SCML2Q9UQR0 700 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 ZNF337Q9Y3M9 751 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 CASP8AP2Q9UKL3 1982 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 TRAPPC13A5PLN9 417 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 ADM5C9JUS6 153 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 J3QLW9 94 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 CLDN7O95471 211 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 MT-ND5P03915 603 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 ZNF14P17017 642 aaPredicted RBP11.85□□□□□ -0.51
HERC3-203ENST00000407637 ZNF19P17023 458 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 MPIP34949 423 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 PTH2RP49190 550 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 TSPAN31Q12999 210 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 GPNMBQ14956 572 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 TGIF1Q15583 401 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 SYPL1Q16563 259 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 LRRTM1Q86UE6 522 aa11.85□□□□□ -0.51
HERC3-203ENST00000407637 LINC01599Q8WXQ3 324 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms