RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 FANCFQ9NPI8 374 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 GPR52Q9Y2T5 361 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 SLCO1B7G3V0H7 640 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 DIO1P49895 249 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 DNAJC14Q6Y2X3 702 aaPredicted RBP17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 GLB1L3Q8NCI6 653 aaPredicted RBP17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 ZNF563Q8TA94 476 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 OIT3Q8WWZ8 545 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 CNOT9Q92600 299 aaKnown RBP17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 ARL8AQ96BM9 186 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 S100PBPQ96BU1 408 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 DNAJA3Q96EY1 480 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 TRNT1Q96Q11 434 aaKnown RBP17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 OR52B2Q96RD2 323 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 CCDC106Q9BWC9 280 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 BCO1Q9HAY6 547 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 CTPS2Q9NRF8 586 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 SERINC1Q9NRX5 453 aa17.14■□□□□ 0.33
SMARCB1-204ENST00000407422 ZNF814B7Z6K7 855 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 SLC22A3O75751 556 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 IDO1P14902 403 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 EDNRAP25101 427 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 NKX6-1P78426 367 aaPredicted RBP17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 RASGEF1BQ0VAM2 473 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 PDCD4Q53EL6 469 aaKnown RBP17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 SYT14P1Q58G82 188 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 BEX5Q5H9J7 111 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 ALKBH2Q6NS38 261 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 TMPPEQ6ZT21 453 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 ZNF300Q96RE9 604 aaPredicted RBP17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 GSX1Q9H4S2 264 aaPredicted RBP17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 KLHL9Q9P2J3 617 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 LIPT1Q9Y234 373 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 CADP27708 2225 aa17.13■□□□□ 0.33
SMARCB1-204ENST00000407422 USF3Q68DE3 2245 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 AGAP5A6NIR3 686 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 SULT2B1O00204 365 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 RFXANKO14593 260 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 CYTIPO60759 359 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 PLAUP00749 431 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 FESP07332 822 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 ARFGAP2Q8N6H7 521 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 PIWIL2Q8TC59 973 aaKnown RBP17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 ZNF75CPQ92670 426 aaPredicted RBP17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 PIGTQ969N2 578 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 PLPPR2Q96GM1 343 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 CCL19Q99731 98 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 EXOSC3Q9NQT5 275 aaKnown RBP17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 CHRNA9Q9UGM1 479 aa17.12■□□□□ 0.33
SMARCB1-204ENST00000407422 ZANQ9Y493 2812 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 AP3D1O14617 1153 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 ADAP00813 363 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 IL6P05231 212 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 TFPIP10646 304 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 APOBEC1P41238 236 aaKnown RBP17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 IDH2P48735 452 aaKnown RBP17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 LRRC74AQ0VAA2 488 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 MAPK11Q15759 364 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 SFRP5Q5T4F7 317 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 LRRC74BQ6ZQY2 392 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 STEAP2Q8NFT2 490 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 OR9I1Q8NGQ6 314 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 ARL5BQ96KC2 179 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 OR11A1Q9GZK7 315 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 OR10A4Q9H209 315 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 SDR39U1Q9NRG7 319 aaPredicted RBP17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 PRSS50Q9UI38 385 aa17.11■□□□□ 0.33
SMARCB1-204ENST00000407422 KLF11O14901 512 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 SMPD2O60906 423 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 NR2F1P10589 423 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 CCNA2P20248 432 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 FPR1P21462 350 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 OR3A2P47893 321 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 MVDP53602 400 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 ZNF704Q6ZNC4 412 aaPredicted RBP17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 GRINAQ7Z429 371 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 ADGRG3Q86Y34 549 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 SLC25A43Q8WUT9 341 aaPredicted RBP17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 PIP5K1AQ99755 562 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 HDHD5Q9BXW7 423 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 MTHFD2LQ9H903 347 aaPredicted RBP17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 NAV3Q8IVL0 2385 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 UBDO15205 165 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 KRT75O95678 551 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 RPS4Y1P22090 263 aaKnown RBP17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 IL32P24001 234 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 ANXA11P50995 505 aaKnown RBP17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 CSNK2A1P68400 391 aaPredicted RBP17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 GSTA3Q16772 222 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 GTDC1Q4AE62 458 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 C20orf204Q6ZNR8 217 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 VPS33AQ96AX1 596 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 TACO1Q9BSH4 297 aaKnown RBP17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 ZIM2Q9NZV7 527 aa17.1■□□□□ 0.33
SMARCB1-204ENST00000407422 ETFAP13804 333 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 IL7RP16871 459 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 NR1H2P55055 460 aa17.09■□□□□ 0.33
SMARCB1-204ENST00000407422 TXNL4AP83876 142 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms