RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 VRK2Q86Y07 508 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 OR52P1PQ8NH57 321 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 SLC38A5Q8WUX1 472 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 ST8SIA1Q92185 356 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 GMPPAQ96IJ6 420 aaPredicted RBP9.25□□□□□ -0.93
FAM49A-202ENST00000406434 GPATCH1Q9BRR8 931 aaKnown RBP9.25□□□□□ -0.93
FAM49A-202ENST00000406434 SLC39A3Q9BRY0 314 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 SRXN1Q9BYN0 137 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 RAD21L1Q9H4I0 556 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 RABEP2Q9H5N1 569 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 CACYBPQ9HB71 228 aaKnown RBP9.25□□□□□ -0.93
FAM49A-202ENST00000406434 CTPS2Q9NRF8 586 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 CALML5Q9NZT1 146 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.25□□□□□ -0.93
FAM49A-202ENST00000406434 ZNF232Q9UNY5 417 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 TRIM33Q9UPN9 1127 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 EMC9Q9Y3B6 208 aa9.25□□□□□ -0.93
FAM49A-202ENST00000406434 C5orf58C9J3I9 102 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 AP3D1O14617 1153 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 NTN1O95631 604 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 TFPTP0C1Z6 253 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 PABPC4LP0CB38 370 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 EPXP11678 715 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 POU2F1P14859 743 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 ENPP1P22413 925 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 CRISP3P54108 245 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 RGNQ15493 299 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 MAPK11Q15759 364 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 RPS26P11Q5JNZ5 115 aaPredicted RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 MRPL2Q5T653 305 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 AP1ARQ63HQ0 302 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 ANKRD34AQ69YU3 496 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 FAM71CQ8NEG0 241 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 OIT3Q8WWZ8 545 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 MAL2Q969L2 176 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 CPNE4Q96A23 557 aaPredicted RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 ZNF775Q96BV0 537 aaPredicted RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 TMEM19Q96HH6 336 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 POLDIP3Q9BY77 421 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 KLHL4Q9C0H6 718 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 C12orf49Q9H741 205 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 RLIMQ9NVW2 624 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 THUMPD1Q9NXG2 353 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 NDRG3Q9UGV2 375 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 A0A0G2JPF8 293 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 A0A1W2PP18 115 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 SH3D21A4FU49 640 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 CFAP73A6NFT4 308 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 A6NNC1 897 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 EVPLLA8MZ36 301 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 HNRNPCL2B2RXH8 293 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 HNRNPCL3B7ZW38 293 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 SULT2B1O00204 365 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 HNRNPCL1O60812 293 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 DNAJA2O60884 412 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 ADAM11O75078 769 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 CTAG2O75638 210 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 PRKD3O94806 890 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 CGAP01215 116 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 GKN3PP0CG01 181 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 HNRNPCL4P0DMR1 293 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 TROVE2P10155 538 aaKnown RBP eCLIP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 NID1P14543 1247 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 CD79BP40259 229 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 APOBEC1P41238 236 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 RAC3P60763 192 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 IRX1P78414 480 aaPredicted RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 SORDQ00796 357 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 GUCY1A3Q02108 690 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 LARS2Q15031 903 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 ZNF239Q16600 458 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 TMEM201Q5SNT2 666 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 GCNT6Q5T4J0 391 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 C3orf33Q6P1S2 294 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 FCRLAQ7L513 359 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 GRINAQ7Z429 371 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 ADGRG3Q86Y34 549 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 TUSC5Q8IXB3 177 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 MSRB3Q8IXL7 192 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 CMIPQ8IY22 773 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 CLIP4Q8N3C7 705 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 ABHD3Q8WU67 409 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 NRGNQ92686 78 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 PMM1Q92871 262 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 TMEM120AQ9BXJ8 343 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 COQ10BQ9H8M1 238 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 SLC52A3Q9NQ40 469 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 EXOSC3Q9NQT5 275 aaKnown RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 PLSCR4Q9NRQ2 329 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 GLRX2Q9NS18 164 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 FGFR1OP2Q9NVK5 253 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 KLHL28Q9NXS3 571 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 ELOVL5Q9NYP7 299 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 SLC25A37Q9NYZ2 338 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 VAPAQ9P0L0 249 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 LEF1Q9UJU2 399 aaPredicted RBP9.24□□□□□ -0.93
FAM49A-202ENST00000406434 NDUFAF1Q9Y375 327 aa9.24□□□□□ -0.93
FAM49A-202ENST00000406434 POLQO75417 2590 aa9.23□□□□□ -0.93
FAM49A-202ENST00000406434 PDZD2O15018 2839 aa9.23□□□□□ -0.93
FAM49A-202ENST00000406434 TMED7-TICAM2A0A0A6YYA0 188 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms