RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 KCNJ15Q99712 375 aa13.94□□□□□ -0.18
ATG4B-206ENST00000405546 RSPH9Q9H1X1 276 aaPredicted RBP13.94□□□□□ -0.18
ATG4B-206ENST00000405546 AUNIPQ9H7T9 357 aa13.94□□□□□ -0.18
ATG4B-206ENST00000405546 SFXN1Q9H9B4 322 aa13.94□□□□□ -0.18
ATG4B-206ENST00000405546 CD93Q9NPY3 652 aa13.94□□□□□ -0.18
ATG4B-206ENST00000405546 IFT46Q9NQC8 304 aa13.94□□□□□ -0.18
ATG4B-206ENST00000405546 DLL4Q9NR61 685 aa13.94□□□□□ -0.18
ATG4B-206ENST00000405546 PCDHGA9Q9Y5G4 932 aaKnown RBP13.94□□□□□ -0.18
ATG4B-206ENST00000405546 KCNMB2Q9Y691 235 aa13.94□□□□□ -0.18
ATG4B-206ENST00000405546 SIRT4Q9Y6E7 314 aaPredicted RBP13.94□□□□□ -0.18
ATG4B-206ENST00000405546 SEC14L5O43304 696 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 LPLP06858 475 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 FNTBP49356 437 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 TPMTP51580 245 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 TSPAN31Q12999 210 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 EXOSC7Q15024 291 aaKnown RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 AGERQ15109 404 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 CLLU1Q5K131 121 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 Q6ZTK2 550 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 LINC00471Q8N535 108 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 IFT27Q9BW83 186 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 NT5DC2Q9H857 520 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 LIN7BQ9HAP6 207 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 CALML5Q9NZT1 146 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 ADAM30Q9UKF2 790 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 CENPVL1A0A0U1RR11 272 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 hCG_1807616A0A1W2PRN6 198 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 PRSS38A1L453 326 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 DUXAA6NLW8 204 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 PRR23D1E9PI22 279 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 CASC3O15234 703 aaKnown RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 CDC123O75794 336 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 GYPBP06028 91 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 PRR23D2P0DMB1 279 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 SNRPBP14678 240 aaKnown RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 PEBP1P30086 187 aaKnown RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 GABRA5P31644 462 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 FRKP42685 505 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 SLC1A3P43003 542 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 GBX2P52951 348 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 CDK5Q00535 292 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 RAB40BQ12829 278 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 OPCMLQ14982 345 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 DUSP5Q16690 384 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 COL28A1Q2UY09 1125 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 GDF7Q7Z4P5 450 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 OR5T3Q8NGG3 340 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 OR52L1Q8NGH7 329 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 OSTF1Q92882 214 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 ZC3HAV1LQ96H79 300 aaKnown RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 SLC22A23A1A5C7 686 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 B3GALT2O43825 422 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 NNATQ16517 81 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 TCTE1Q5JU00 501 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 SLC25A25Q6KCM7 469 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 OR2T33Q8NG76 320 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 OR4Q3Q8NH05 313 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 OR1E3Q8WZA6 343 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 RERGQ96A58 199 aaPredicted RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 CCDC3Q9BQI4 270 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 BCL2L10Q9HD36 194 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 FBXO34Q9NWN3 711 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 USP36Q9P275 1121 aaKnown RBP13.93□□□□□ -0.18
ATG4B-206ENST00000405546 LIPT1Q9Y234 373 aa13.93□□□□□ -0.18
ATG4B-206ENST00000405546 TRIOO75962 3097 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 H3BSH0 61 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 TBX19O60806 448 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 H2AFB2P0C5Z0 115 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 TYRP1P17643 537 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 PBX2P40425 430 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 VASPP50552 380 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 NLRC3Q7RTR2 1065 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 CDK20Q8IZL9 346 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 SDR16C5Q8N3Y7 309 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 KLHL36Q8N4N3 616 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 RELL2Q8NC24 303 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 OR51L1Q8NGJ5 315 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 ACOT11Q8WXI4 607 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 TIMM29Q9BSF4 260 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 MRPL39Q9NYK5 338 aaKnown RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 WSB2Q9NYS7 404 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 GDE1Q9NZC3 331 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 ACAD8Q9UKU7 415 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 REV3LO60673 3130 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 MDC1Q14676 2089 aaKnown RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 MTCL1Q9Y4B5 1905 aaKnown RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 PEX12O00623 359 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 KLF8O95600 359 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 NDUFV2P19404 249 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 VEGFCP49767 419 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 ZP1P60852 638 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 TMEM201Q5SNT2 666 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 PRSS41Q7RTY9 318 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 TRMT10AQ8TBZ6 339 aaKnown RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 HERVK_113Q902F9 699 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 RELTQ969Z4 430 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 KIAA1143Q96AT1 154 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 TTYH1Q9H313 450 aaPredicted RBP13.92□□□□□ -0.18
ATG4B-206ENST00000405546 ALPK3Q96L96 1907 aa13.92□□□□□ -0.18
ATG4B-206ENST00000405546 DAPL1A0PJW8 107 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms