RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CSTF1Q05048 431 aaKnown RBP2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 VGLL4Q14135 290 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 PDK3Q15120 406 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 ZMYND11Q15326 602 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC15A2Q16348 729 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 EXOC3L2Q2M3D2 409 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 C9orf129Q5T035 196 aaKnown RBP2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 UTF1Q5T230 341 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 GPRC6AQ5T6X5 926 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 CCDC137Q6PK04 289 aaKnown RBP2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 DHDDSQ86SQ9 333 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 SKA3Q8IX90 412 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 NRMQ8IXM6 262 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 MFSD9Q8NBP5 474 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 MAIP1Q8WWC4 291 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 FGF11Q92914 225 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 SLC41A3Q96GZ6 507 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 MTMR9Q96QG7 549 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 MAPKAP1Q9BPZ7 522 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 GCOM2Q9BZD3 368 aaPredicted RBP2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 NAT10Q9H0A0 1025 aaKnown RBP2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 PTGES2Q9H7Z7 377 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 TNFRSF19Q9NS68 423 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 RASD1Q9Y272 281 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 CA5BQ9Y2D0 317 aa2.84□□□□□ -1.95
HMGB1P17-201ENST00000403495 IGLV3-10A0A075B6K4 115 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 A0A0G2JRQ6 117 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ARHGEF35A5YM69 484 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 B4DXG7 233 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 TRDCB7Z8K6 153 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF264O43296 627 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 CXCL13O43927 109 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 B4GALT2O60909 372 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 SLITRK3O94933 977 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 SERPINA3P01011 423 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 IGHV3-23P01764 117 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 P0C879 139 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF853P0CG23 659 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 IMPDH1P20839 514 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ATP6V1B2P21281 511 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 PBLDP30039 288 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 HTR1FP30939 366 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 QARSP47897 775 aaKnown RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 DAP3P51398 398 aaKnown RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 P2RY4P51582 365 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 EFNA3P52797 238 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 KRTAP10-6P60371 365 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 IGLV3-21P80748 117 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 SLC10A7Q0GE19 358 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 GRB7Q14451 532 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 GANABQ14697 944 aaKnown RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 KIAA0040Q15053 153 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 PRR4Q16378 134 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 SPATA46Q5T0L3 261 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 LCE3CQ5T5A8 94 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 BAIAP2L2Q6UXY1 529 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 Q6ZR54 194 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 EFL1Q7Z2Z2 1120 aaKnown RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 HSD17B13Q7Z5P4 300 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF589Q86UQ0 364 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 C17orf82Q86X59 251 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 CCDC65Q8IXS2 484 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 BHLHE23Q8NDY6 225 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF564Q8TBZ8 553 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 SCFD1Q8WVM8 642 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 COQ2Q96H96 371 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 PGLYRP4Q96LB8 373 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 TCEANC2Q96MN5 208 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 RBM14Q96PK6 669 aaKnown RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 PLEKHF1Q96S99 279 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZBTB18Q99592 522 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF184Q99676 751 aaPredicted RBP2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 GAL3ST1Q99999 423 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF670Q9BS34 389 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 SLC35A5Q9BS91 424 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 NIPSNAP3BQ9BS92 247 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 CNPY3Q9BT09 278 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 C19orf24Q9BVV8 132 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 NMUR2Q9GZQ4 415 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 SLITRK2Q9H156 845 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZNF702PQ9H963 129 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 LRRC40Q9H9A6 602 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 VNN3Q9NY84 501 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ONECUT1Q9UBC0 465 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 PHF11Q9UIL8 331 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 ADAM28Q9UKQ2 775 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 STAP1Q9ULZ2 295 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 HPCAL4Q9UM19 191 aa2.83□□□□□ -1.96
HMGB1P17-201ENST00000403495 LRRK1Q38SD2 2015 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 IGHV1OR15-1A0A075B7D0 117 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 IGKV1D-8A0A087WSZ0 117 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 ZFP92A6NM28 416 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 TNFSF11O14788 317 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 NBR2O15453 112 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 MBTPS2O43462 519 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 TIMM8AO60220 97 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 PFKFB2O60825 505 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 TBL1XO60907 577 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 UGT2B17O75795 530 aa2.82□□□□□ -1.96
HMGB1P17-201ENST00000403495 HSPB1P04792 205 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms