RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 TATDN3Q17R31 274 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 ZSWIM7Q19AV6 140 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 DEFB133Q30KQ1 61 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 CCDC92Q53HC0 331 aaPredicted RBP4.03□□□□□ -1.77
SMC6-203ENST00000402989 ZNF628Q5EBL2 1059 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 XKRXQ6PP77 449 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 C19orf48Q6RUI8 117 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 KIRREL2Q6UWL6 708 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 TMEM91Q6ZNR0 172 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 GDPGP1Q6ZNW5 385 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 LINC00299Q6ZSB3 139 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 MEPCEQ7L2J0 689 aaKnown RBP4.03□□□□□ -1.77
SMC6-203ENST00000402989 NR2C2APQ86WQ0 139 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 GJD3Q8N144 294 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 CA13Q8N1Q1 262 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 OR2L13Q8N349 312 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 ZNF655Q8N720 491 aaPredicted RBP4.03□□□□□ -1.77
SMC6-203ENST00000402989 CDRT4Q8N9R6 151 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 BEST4Q8NFU0 473 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 OR4M1Q8NGD0 313 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 LMX1AQ8TE12 382 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 ZDHHC1Q8WTX9 485 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 SMPDL3BQ92485 455 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 RIT1Q92963 219 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 PMEPA1Q969W9 287 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 ITPKCQ96DU7 683 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 NMNAT3Q96T66 252 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 ATF6BQ99941 703 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 PRSS27Q9BQR3 290 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 NDC1Q9BTX1 674 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 RNF121Q9H920 327 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 FGF20Q9NP95 211 aaPredicted RBP4.03□□□□□ -1.77
SMC6-203ENST00000402989 BRD7Q9NPI1 651 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 OBP2AQ9NY56 170 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 IL20Q9NYY1 176 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 FLRT3Q9NZU0 649 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 C19orf53Q9UNZ5 99 aaPredicted RBP4.03□□□□□ -1.77
SMC6-203ENST00000402989 SF3B6Q9Y3B4 125 aaKnown RBP4.03□□□□□ -1.77
SMC6-203ENST00000402989 ALG5Q9Y673 324 aa4.03□□□□□ -1.77
SMC6-203ENST00000402989 MUC22E2RYF6 1773 aaPredicted RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 ARID1AO14497 2285 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 A0A087WV48 116 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 A0A0J9YY10 115 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 IQCMA0A1B0GVH7 501 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 TVP23AA6NH52 213 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 ACOD1A6NK06 481 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 MCIDASD6RGH6 385 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 C11orf98E9PRG8 122 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 LYRM1O43325 122 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 HCN1O60741 890 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 RGS9O75916 674 aaPredicted RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 RCBTB2O95199 551 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 PLGP00747 810 aaPredicted RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 CSTAP01040 98 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 EIF4EP06730 217 aaKnown RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 SYPP08247 313 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 PTHLHP12272 177 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 HIST1H1CP16403 213 aaKnown RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 ZNF3P17036 446 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 EDNRAP25101 427 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 ITPKBP27987 946 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 TNFRSF4P43489 277 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 PPP3R1P63098 170 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 IFITM2Q01629 132 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 GPR50Q13585 617 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 HES5Q5TA89 166 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 BCL2L15Q5TBC7 163 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 C1orf189Q5VU69 101 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 MZT2AQ6P582 158 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 USP53Q70EK8 1073 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 PRSS45Q7RTY3 260 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 TIGD4Q8IY51 512 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 POGLUT1Q8NBL1 392 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 OR6F1Q8NGZ6 308 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 OR4C3Q8NH37 302 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 PHOSPHO1Q8TCT1 267 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 ZPLD1Q8TCW7 415 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 THAP3Q8WTV1 239 aaPredicted RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 CHAC2Q8WUX2 184 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 PCNPQ8WW12 178 aaKnown RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 PTP4A1Q93096 173 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 DGAT2Q96PD7 388 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 TEAD3Q99594 435 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 COQ7Q99807 217 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 ZNF350Q9GZX5 532 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 TRPV4Q9HBA0 871 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 SRA1Q9HD15 236 aaKnown RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 TRIM36Q9NQ86 728 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 MCUBQ9NWR8 336 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 BABAM2Q9NXR7 383 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 CLEC1BQ9P126 229 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 TEKT2Q9UIF3 430 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 ZNF222Q9UK12 451 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 ING1Q9UK53 422 aaPredicted RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 PILRAQ9UKJ1 303 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 COL6A3P12111 3177 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 PRRC2CQ9Y520 2896 aaKnown RBP4.02□□□□□ -1.77
SMC6-203ENST00000402989 A0A0B4J293 547 aa4.02□□□□□ -1.77
SMC6-203ENST00000402989 IRGMA1A4Y4 181 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms