RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 HNRNPRO43390 633 aaKnown RBP17.22■□□□□ 0.35
RTN4-207ENST00000402434 CXCL13O43927 109 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 TNFSF13O75888 250 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 AQP8O94778 261 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 FCGR2AP12318 317 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 AGFG1P52594 562 aaKnown RBP17.22■□□□□ 0.35
RTN4-207ENST00000402434 MMEL1Q495T6 779 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 ZNF311Q5JNZ3 666 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 REP15Q6BDI9 236 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 NET1Q7Z628 596 aaPredicted RBP17.22■□□□□ 0.35
RTN4-207ENST00000402434 SERPINA11Q86U17 422 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 HIPK4Q8NE63 616 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 RP9Q8TA86 221 aaKnown RBP17.22■□□□□ 0.35
RTN4-207ENST00000402434 SLC35B4Q969S0 331 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 SLC39A3Q9BRY0 314 aa17.22■□□□□ 0.35
RTN4-207ENST00000402434 NSRP1Q9H0G5 558 aaKnown RBP17.22■□□□□ 0.35
RTN4-207ENST00000402434 CACYBPQ9HB71 228 aaKnown RBP17.22■□□□□ 0.35
RTN4-207ENST00000402434 NOTCH2Q04721 2471 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 A0A1W2PNV4 684 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 UQCRBP14927 111 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 FKBP2P26885 142 aaKnown RBP17.21■□□□□ 0.35
RTN4-207ENST00000402434 SLC1A3P43003 542 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 HTR3AP46098 478 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 ASCL1P50553 236 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 GZMMP51124 257 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 GNGT1P63211 74 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 GUSBP1Q15486 140 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 CPLX4Q7Z7G2 160 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 MTDHQ86UE4 582 aaKnown RBP17.21■□□□□ 0.35
RTN4-207ENST00000402434 ADGRG3Q86Y34 549 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 KRT73Q86Y46 540 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 PCYOX1LQ8NBM8 494 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 C11orf65Q8NCR3 313 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 OR8J3Q8NGG0 315 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 SLC25A43Q8WUT9 341 aaPredicted RBP17.21■□□□□ 0.35
RTN4-207ENST00000402434 SH3GL1Q99961 368 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 SPATA5L1Q9BVQ7 753 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 FAM107BQ9H098 131 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 COQ10BQ9H8M1 238 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 TIGARQ9NQ88 270 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 CTPS2Q9NRF8 586 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 MCTS1Q9ULC4 181 aaKnown RBP17.21■□□□□ 0.35
RTN4-207ENST00000402434 CACNA1DQ01668 2161 aa17.21■□□□□ 0.35
RTN4-207ENST00000402434 CYSRT1A8MQ03 144 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 GKN3PP0CG01 181 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 COX6B1P14854 86 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 PRKAR1BP31321 381 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 KIR2DL2P43627 348 aaPredicted RBP17.2■□□□□ 0.34
RTN4-207ENST00000402434 PCBP3P57721 371 aaKnown RBP17.2■□□□□ 0.34
RTN4-207ENST00000402434 CYP51A1Q16850 503 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 ZNF550Q7Z398 422 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 ATP6V1C2Q8NEY4 427 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 CPNE4Q96A23 557 aaPredicted RBP17.2■□□□□ 0.34
RTN4-207ENST00000402434 ADAM19Q9H013 955 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 MYLK2Q9H1R3 596 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 PIGMQ9H3S5 423 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 CHRNA9Q9UGM1 479 aa17.2■□□□□ 0.34
RTN4-207ENST00000402434 SYNGR4O95473 234 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 SLC7A1P30825 629 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 MAP2K6P52564 334 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 RAC3P60763 192 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 ITPR2Q14571 2701 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 ZNF239Q16600 458 aaKnown RBP17.19■□□□□ 0.34
RTN4-207ENST00000402434 SYT14P1Q58G82 188 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 RABL3Q5HYI8 236 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 DHRS4L2Q6PKH6 230 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 OR10A6Q8NH74 314 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 MARVELD3Q96A59 401 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 STARD4Q96DR4 205 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 ZNF607Q96SK3 696 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 SRXN1Q9BYN0 137 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 PRRG4Q9BZD6 226 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 GID8Q9NWU2 228 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 OSGIN1Q9UJX0 560 aa17.19■□□□□ 0.34
RTN4-207ENST00000402434 GCM2O75603 506 aaPredicted RBP17.18■□□□□ 0.34
RTN4-207ENST00000402434 SERPINB7O75635 380 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 COX4I1P13073 169 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 PRG2P13727 222 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 CLK1P49759 484 aaKnown RBP17.18■□□□□ 0.34
RTN4-207ENST00000402434 CALHM3Q86XJ0 350 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 TREML1Q86YW5 311 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 SLC30A8Q8IWU4 369 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 DMRTC2Q8IXT2 367 aaPredicted RBP17.18■□□□□ 0.34
RTN4-207ENST00000402434 ZZZ3Q8IYH5 903 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 POU5F2Q8N7G0 328 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 RNASE6Q93091 150 aaKnown RBP17.18■□□□□ 0.34
RTN4-207ENST00000402434 GMPPAQ96IJ6 420 aaPredicted RBP17.18■□□□□ 0.34
RTN4-207ENST00000402434 GLRX2Q9NS18 164 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 FOXD3Q9UJU5 478 aaPredicted RBP17.18■□□□□ 0.34
RTN4-207ENST00000402434 PACSIN3Q9UKS6 424 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 ANGPT4Q9Y264 503 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 SPIN1Q9Y657 262 aaPredicted RBP17.18■□□□□ 0.34
RTN4-207ENST00000402434 A0A1W2PNR3 127 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 PRORSD1PA6NEY8 169 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 EEF1E1-BLOC1S5C9J1V9 151 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 EEF1E1O43324 174 aaKnown RBP17.18■□□□□ 0.34
RTN4-207ENST00000402434 TPST1O60507 370 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 MFN2O95140 757 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 TACR3P29371 465 aa17.18■□□□□ 0.34
RTN4-207ENST00000402434 AQP1P29972 269 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms