RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 LRFN4Q6PJG9 635 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 GKN2Q86XP6 184 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 TMEM239Q8WW34 195 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 GPX7Q96SL4 187 aaPredicted RBP8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 GSTO2Q9H4Y5 243 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 GPATCH2LQ9NWQ4 482 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 LHX6Q9UPM6 363 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 NKX6-3A6NJ46 265 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 ZFP92A6NM28 416 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 A8MUI8 341 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 TNFP01375 233 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 SLC36A2Q495M3 483 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF595Q8IYB9 648 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 PRSS58Q8IYP2 241 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 ST8SIA2Q92186 375 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 SMOQ99835 787 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 LAMP3Q9UQV4 416 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 CPS1P31327 1500 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 FABP2P12104 132 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 PYCR1P32322 319 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF543Q08ER8 600 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 ETFDHQ16134 617 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 GAS2L1Q99501 681 aaPredicted RBP8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 RDH14Q9HBH5 336 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 PCDHGC4Q9Y5F7 938 aa8.11□□□□□ -1.11
CACNA1C-220ENST00000399655 CNTN5O94779 1100 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 TIMP2P16035 220 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF157P51786 506 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 XYLT1Q86Y38 959 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 FUNDC1Q8IVP5 155 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 EXD3Q8N9H8 876 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR4F5Q8NH21 305 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 IL31RAQ8NI17 732 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR4F4Q96R69 305 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR2T8A6NH00 312 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 RPLP1P05386 114 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 BCHEP06276 602 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 MYCLP1P12525 358 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 CEBPAP49715 358 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ARF6P62330 175 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 POM121L1PQ3SYA9 428 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 AFMIDQ63HM1 303 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 LCORQ96JN0 433 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF599Q96NL3 588 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 MMP24Q9Y5R2 645 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ANTXRLA6NF34 631 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ZPBP2Q6X784 338 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 RPF2Q9H7B2 306 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 SPANXA1Q9NS26 97 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 TCRBV21S2A2A0A5A6 115 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 POP4O95707 220 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR5AL1P0C617 328 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 BAATQ14032 418 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 MANEALQ5VSG8 457 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ENTHD1Q8IYW4 607 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR10Q1Q8NGQ4 319 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR1J2Q8NGS2 313 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 OR14C36Q8NHC7 312 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 NDRG1Q92597 394 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 SCML1Q9UN30 329 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 STRAPQ9Y3F4 350 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 DISP2A7MBM2 1401 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 UPK1BO75841 260 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 CBR1P16152 277 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 PLP1P60201 277 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 LAMTOR4Q0VGL1 99 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 EBPQ15125 230 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 TMEM184AQ6ZMB5 413 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 VRK2Q86Y07 508 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 MAP1LC3CQ9BXW4 147 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 EXOSC3Q9NQT5 275 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 C14orf119Q9NWQ9 140 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 EHFQ9NZC4 300 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 B3GAT1Q9P2W7 334 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 GIMAP2Q9UG22 337 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 H2AFB1P0C5Y9 115 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 LAMP1P11279 417 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ARNTP27540 789 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 HSPA7P48741 367 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 SMAD3P84022 425 aaKnown RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 TMEM115Q12893 351 aaPredicted RBP8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 DEFB106AQ8N104 65 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 LGALS12Q96DT0 336 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 DEC1Q9P2X7 70 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 URGCP-MRPS24S4R325 110 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 TPOP07202 933 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 MPGP29372 298 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 CD81P60033 236 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 P2RY14Q15391 338 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 PRAMEF20Q5VT98 475 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 H3F3CQ6NXT2 135 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ASRGL1Q7L266 308 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 MKXQ8IYA7 352 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF558Q96NG5 402 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 CLMPQ9H6B4 373 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 EVA1AQ9H8M9 152 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 JRKO75564 520 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ENGP17813 658 aa8.1□□□□□ -1.11
CACNA1C-220ENST00000399655 ZNF133P52736 654 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms