RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 PGDP52209 483 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GFERP55789 205 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SLC37A1P57057 533 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CRYZQ08257 329 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 HNRNPA0Q13151 305 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IL10RAQ13651 578 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ELAVL1Q15717 326 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DEFB133Q30KQ1 61 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SLC35D3Q5M8T2 416 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 LCN1P1Q5VSP4 162 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 KIRREL2Q6UWL6 708 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SNX29P2Q8IUI4 249 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GPR135Q8IZ08 494 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SHISA5Q8N114 240 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 OR51A7Q8NH64 312 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 HLA-CQ95604 372 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NACC2Q96BF6 587 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 OTULINQ96BN8 352 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IER2Q9BTL4 223 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ENKD1Q9H0I2 346 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DUSP15Q9H1R2 295 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MCCC2Q9HCC0 563 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CHRNA9Q9UGM1 479 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ADAM30Q9UKF2 790 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 V9GYH0 126 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 IGHV1OR21-1A0A087WYE8 117 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CCDC182A6NF36 153 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 FAM183AA6NL82 134 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 HRKO00198 91 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GABRPO00591 440 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CASKO14936 926 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TOX3O15405 576 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RFPL3O75679 317 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CDC123O75794 336 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RGS9O75916 674 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CLPSP04118 112 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SLC6A8P48029 635 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MTNR1BP49286 362 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SCN1BQ07699 218 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ERV3-1Q14264 604 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GGTLC2Q14390 218 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GLYR1Q49A26 553 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 ZC3H14Q6PJT7 736 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 WDR74Q6RFH5 385 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SHFQ7M4L6 423 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PRSS42Q7Z5A4 293 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TPRA1Q86W33 373 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GATAD2AQ86YP4 633 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TMEM151BQ8IW70 566 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CADM3Q8N126 398 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 CADM2Q8N3J6 435 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 MS4A15Q8N5U1 240 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 OR4C3Q8NH37 302 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 NEIL3Q8TAT5 605 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 PTPMT1Q8WUK0 201 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 KCTD12Q96CX2 325 aaKnown RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 GPX7Q96SL4 187 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 SDHCQ99643 169 aaPredicted RBP16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TM9SF2Q99805 663 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TOR4AQ9NXH8 423 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 DTX4Q9Y2E6 619 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 RNF215Q9Y6U7 377 aa16.28■□□□□ 0.2
HLA-DQB1-204ENST00000399084 TRAV27A0A087WT01 109 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 A0A1W2PPC1 479 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 A0A1W2PQL4 384 aaPredicted RBP16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 DLL1O00548 723 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SCDO00767 359 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CD1AP06126 327 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR2T7P0C7T2 308 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 MAOBP27338 520 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 GTF2E2P29084 291 aaKnown RBP16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SEPHS1P49903 392 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FHL1Q13642 323 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 KLHL12Q53G59 568 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SLC35F1Q5T1Q4 408 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FNDC7Q5VTL7 733 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 PAMR1Q6UXH9 720 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 KLBQ86Z14 1044 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SYS1Q8N2H4 156 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 DEFB119Q8N690 84 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 TEX19Q8NA77 164 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR2T27Q8NH04 317 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 DAZLQ92904 295 aaKnown RBP16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 LCORQ96JN0 433 aaPredicted RBP16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SLC41A2Q96JW4 573 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SRRQ9GZT4 340 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 SLC6A5Q9Y345 797 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 GRIP1Q9Y3R0 1128 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 CLCA3PQ9Y6N3 262 aa16.27■□□□□ 0.19
HLA-DQB1-204ENST00000399084 FABP12A6NFH5 140 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 IMPA2O14732 288 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 BCAT2O15382 392 aaPredicted RBP16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 RNF13O43567 381 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 ADAM11O75078 769 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 OR7A10O76100 309 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 PPP1R3DO95685 299 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 DLGAP3O95886 979 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 LALBAP00709 142 aa16.26■□□□□ 0.19
HLA-DQB1-204ENST00000399084 IGKV3-11P04433 115 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms