RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 EIF1P41567 113 aaKnown RBP11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SLC1A3P43003 542 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SUCLG1P53597 346 aaKnown RBP11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 MERTKQ12866 999 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 GXYLT1Q4G148 440 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 WBP2NLQ6ICG8 309 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CYP2R1Q6VVX0 501 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 GRINAQ7Z429 371 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ATG4DQ86TL0 474 aaPredicted RBP11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CD163Q86VB7 1156 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 DOLPP1Q86YN1 238 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 EID3Q8N140 333 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CADM2Q8N3J6 435 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RPRMLQ8N4K4 120 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OR5M9Q8NGP3 310 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF563Q8TA94 476 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TMEM234Q8WY98 164 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PROX1Q92786 737 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RELTQ969Z4 430 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SARAFQ96BY9 339 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 DTNBP1Q96EV8 351 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 NSMCE2Q96MF7 247 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 MCHR1Q99705 422 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 AMBRA1Q9C0C7 1298 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TMEM185BQ9H7F4 350 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 COQ10BQ9H8M1 238 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 EVA1AQ9H8M9 152 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADPRHL2Q9NX46 363 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 KLHL28Q9NXS3 571 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TINAGQ9UJW2 476 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 MPDZO75970 2070 aa11.18□□□□□ -0.62
HLA-DQB1-203ENST00000399082 UBR5O95071 2799 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RP1L1Q8IWN7 2480 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 HIVEP3Q5T1R4 2406 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ESPL1Q14674 2120 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 A0A0B4J2E0 115 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 A0A0J9YW62 118 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 A0A1B0GX12 115 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TMEM72A0PK05 275 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZC3H12DA2A288 527 aaKnown RBP11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CPSF4LA6NMK7 179 aaKnown RBP11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 FAM47E-STBD1D6RA91 191 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 BCKDKO14874 412 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PRSS23O95084 383 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TPOP07202 933 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 STSP08842 583 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ABOP16442 354 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 POU3F2P20265 443 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RAC1P63000 192 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SELENBP1Q13228 472 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OR1Q1Q15612 314 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 BCL2A1Q16548 175 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 IFI44LQ53G44 452 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RTL6Q6ICC9 239 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 AAGABQ6PD74 315 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 POMZP3Q6PJE2 187 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 PLXDC2Q6UX71 529 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 WDR88Q6ZMY6 472 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 NCCRP1Q6ZVX7 275 aaPredicted RBP11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ADGRE4PQ86SQ3 457 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF605Q86T29 641 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SMPDL3BQ92485 455 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 C7orf34Q96L11 122 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ZNF559Q9BR84 538 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 MUC13Q9H3R2 512 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RPS6KA6Q9UK32 745 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SLC13A4Q9UKG4 626 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 OSGIN2Q9Y236 505 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 POMPQ9Y244 141 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 FAM215AQ9Y5M1 114 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 AP4B1Q9Y6B7 739 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 V9GYQ6 96 aa11.17□□□□□ -0.62
HLA-DQB1-203ENST00000399082 IGKV1D-42A0A075B6H8 117 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TMED7-TICAM2A0A0A6YYA0 188 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 LINC01387J3KSC0 135 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 J3KTA2 159 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 FFAR1O14842 300 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 NPIPB7O75200 414 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CCNA2P20248 432 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 APOBEC1P41238 236 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CA7P43166 264 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RASSF2P50749 326 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 POLR2HP52434 150 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 CDH12P55289 794 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 VLDLRP98155 873 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RBPJQ06330 500 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 TRAP1Q12931 704 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 EIF2S3LQ2VIR3 472 aaKnown RBP11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ACSF3Q4G176 576 aaPredicted RBP11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ENTPD8Q5MY95 495 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 C1QL3Q5VWW1 255 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 C3orf33Q6P1S2 294 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 C3P1Q6ZMU1 363 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 SEM1Q6ZVN7 128 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 RANBP3LQ86VV4 465 aaPredicted RBP11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 DHFR2Q86XF0 187 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 UBQLNLQ8IYU4 475 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 LILRA2Q8N149 483 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 MARVELD2Q8N4S9 558 aa11.16□□□□□ -0.62
HLA-DQB1-203ENST00000399082 ATP6V1C2Q8NEY4 427 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms