RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SLC38A1Q9H2H9 487 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 PLSCR3Q9NRY6 295 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM30AQ9NV96 361 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 OSER1Q9NX31 292 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 DHCR7Q9UBM7 475 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 GHRLQ9UBU3 117 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ZDHHC8Q9ULC8 765 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ICKQ9UPZ9 632 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 BDP1A6H8Y1 2624 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ADAM10O14672 748 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 KLK8O60259 260 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SRPX2O60687 465 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SEC14L2O76054 403 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SLCO2B1O94956 709 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 WISP3O95389 354 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ZIC2O95409 532 aaPredicted RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ATXN1LP0C7T5 689 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 UBCP0CG48 685 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ITGA3P26006 1051 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 S100A7P31151 101 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 CASRP41180 1078 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 UFM1P61960 85 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TSNQ15631 228 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 IMPG1Q17R60 797 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM249Q2WGJ8 235 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ARHGAP15Q53QZ3 475 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 RAET1LQ5VY80 246 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 LEMD1Q68G75 181 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TIGD3Q6B0B8 471 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 OR8G2PQ6IF36 304 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 REEP3Q6NUK4 255 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ZC3H14Q6PJT7 736 aaKnown RBP6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 GPSM1Q86YR5 675 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TDHQ8IZJ6 230 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 HSD17B11Q8NBQ5 300 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 FAM110BQ8TC76 370 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 DUSP19Q8WTR2 217 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 EXTL1Q92935 676 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 C4orf36Q96KX1 117 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC35A5Q9BS91 424 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 NT5DC2Q9H857 520 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 TMLHEQ9NVH6 421 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF639Q9UID6 485 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 STUB1Q9UNE7 303 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 GSTK1Q9Y2Q3 226 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 BOLA1Q9Y3E2 137 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 PCDHB7Q9Y5E2 793 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 SLCO1B1Q9Y6L6 691 aa6.13□□□□□ -1.43
TM9SF4-202ENST00000398022 GLOD5A6NK44 160 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 J3KR12 359 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 DLL1O00548 723 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 LDB2O43679 373 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 RAMP3O60896 148 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CYP7B1O75881 506 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ADH1BP00325 375 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CYBAP13498 195 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF30P17039 623 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 FMO4P31512 558 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 MMP12P39900 470 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 P2RY2P41231 377 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PNLIPRP1P54315 467 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 EPHB3P54753 998 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SNU13P55769 128 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SUMO1P63165 101 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 RING1Q06587 406 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 MAD2L1Q13257 205 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 GRB14Q14449 540 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF630Q2M218 657 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PAGE3Q5JUK9 113 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF836Q6ZNA1 936 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 TECPR1Q7Z6L1 1165 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 RTN4RL1Q86UN2 441 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF100Q8IYN0 542 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF557Q8N988 423 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 OR2T12Q8NG77 320 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PHOSPHO1Q8TCT1 267 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PPP1R13LQ8WUF5 828 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF419Q96HQ0 510 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 HHIPQ96QV1 700 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ANKRA2Q9H9E1 313 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 NUDT5Q9UKK9 219 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SLC7A11Q9UPY5 501 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 NEU3Q9UQ49 428 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CCDC187A0A096LP49 1063 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 LOC285095A0A1B0GVY8 99 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 ARL5CA6NH57 179 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 NPIPB15A6NHN6 443 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PPP6CO00743 305 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CHST10O43529 356 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CST1P01037 141 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 SPARCP09486 303 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 METTL15P1P0C7V9 234 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 MTHFD2P13995 350 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 RFC3P40938 356 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 FRKP42685 505 aaPredicted RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 CD81P60033 236 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 PKIAP61925 76 aa6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 MRPS6P82932 125 aaKnown RBP6.12□□□□□ -1.43
TM9SF4-202ENST00000398022 TLE4Q04727 773 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms