RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TRAV27A0A087WT01 109 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF879B4DU55 563 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ICOSLGO75144 302 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 OPN1LWP04000 364 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 CYC1P08574 325 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 FTH1P19P0C7X4 201 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 S1PR1P21453 382 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 F8A1P23610 371 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 MAPK3P27361 379 aaPredicted RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 GALNSP34059 522 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 OMPP47874 163 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ERVK-25P63136 954 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 FOXK1P85037 733 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 GLO1Q04760 184 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ANKDD1AQ495B1 522 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 RASSF6Q6ZTQ3 369 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 SHFQ7M4L6 423 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 TMPRSS12Q86WS5 348 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 CPOQ8IVL8 374 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF283Q8N7M2 679 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 TEX19Q8NA77 164 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 APMAPQ9HDC9 416 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 SIDT1Q9NXL6 827 aaKnown RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 EP300Q09472 2414 aaPredicted RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 PTPRDP23468 1912 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 MT-ATP6P00846 226 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 SERPINA7P05543 415 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ITGAMP11215 1152 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 UBE2NP61088 152 aaKnown RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 APOFQ13790 326 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 PGGHGQ32M88 737 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 NDUFAF6Q330K2 333 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 TMEM236Q5W0B7 351 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 JMJD6Q6NYC1 403 aaPredicted RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 NANOS1Q8WY41 292 aaKnown RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ST8SIA1Q92185 356 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 FCRL1Q96LA6 429 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 C10orf90Q96M02 699 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 RBM24Q9BX46 236 aaKnown RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 PARPBPQ9NWS1 579 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 SEC14L4Q9UDX3 406 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 FBXL4Q9UKA2 621 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 TCFL5Q9UL49 500 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 GPR52Q9Y2T5 361 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 MAGED1Q9Y5V3 778 aaPredicted RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 NLRC5Q86WI3 1866 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 DOCK4Q8N1I0 1966 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 A0A1B0GVI7 797 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 LINC00854A0A1B0GVQ3 168 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ASPDHA6ND91 283 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 CYR61O00622 381 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 TBX1O43435 398 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 KHDRBS3O75525 346 aaKnown RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ALPLP05186 524 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 CCNOP22674 350 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 GSTT1P30711 240 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 CSNK1A1P48729 337 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 SELENOVP59797 346 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 GABARAPL2P60520 117 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 POU3F1Q03052 451 aaPredicted RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 TGFBR3Q03167 851 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 TRIM16LQ309B1 348 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 FAM69AQ5T7M9 428 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 C3orf33Q6P1S2 294 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 SLCO6A1Q86UG4 719 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 SLC43A2Q8N370 569 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 TMEM102Q8N9M5 508 aaPredicted RBP7.62□□□□□ -1.19
PTPRD-204ENST00000397606 CT55Q8WUE5 264 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 KCTD7Q96MP8 289 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF350Q9GZX5 532 aa7.62□□□□□ -1.19
PTPRD-204ENST00000397606 VGLL3A8MV65 326 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SLC1A7O00341 560 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 PRODHO43272 600 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 FOXS1O43638 330 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 PRICKLE3O43900 615 aaPredicted RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 IGHG1P01857 330 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 FPR3P25089 353 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SLC3A1Q07837 685 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF57Q68EA5 555 aaPredicted RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SLC6A19Q695T7 634 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SLC18B1Q6NT16 456 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 ZNF367Q7RTV3 350 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CALHM3Q86XJ0 350 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 GRAMD2AQ8IUY3 354 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CHERPQ8IWX8 916 aaKnown RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 CYB561A3Q8NBI2 242 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 FNDC8Q8TC99 324 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 S100ZQ8WXG8 99 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 PPP1R14AQ96A00 147 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SLC38A1Q9H2H9 487 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 GPATCH2Q9NW75 528 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 PCDHGB6Q9Y5F9 930 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 NYNRINQ9P2P1 1898 aaKnown RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 C2orf72A6NCS6 295 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 GASTP01350 101 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 HLCSP50747 726 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 SUMO3P55854 103 aaPredicted RBP7.61□□□□□ -1.19
PTPRD-204ENST00000397606 TUBA3CQ13748 450 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 FAM205BPQ63HN1 556 aa7.61□□□□□ -1.19
PTPRD-204ENST00000397606 TMPPEQ6ZT21 453 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms