RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 OTUD3Q5T2D3 398 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 SWT1Q5T5J6 900 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 ANKRD34AQ69YU3 496 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 ULK3Q6PHR2 472 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 PACRGLQ8N7B6 248 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 MDS2Q8NDY4 140 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 GIPC3Q8TF64 312 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 HAS2Q92819 552 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 C3orf49Q96BT1 292 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 SDCCAG3Q96C92 435 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 TMEM41AQ96HV5 264 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 OSBPL10Q9BXB5 764 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 DSN1Q9H410 356 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 TIMMDC1Q9NPL8 285 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 RPS6KB2Q9UBS0 482 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 TMCC3Q9ULS5 477 aa15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 TNRC6AQ8NDV7 1962 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-205ENST00000397406 CNTRLQ7Z7A1 2325 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 A0A087WUU8 490 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 A0A0G2JMM0 328 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 A0A1W2PPB8 328 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 A0A1W2PRS3 328 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 OR5H15A6NDH6 313 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 ARRDC5A6NEK1 342 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 KIR3DP1A8MWS1 328 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 SLC25A12O75746 678 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 CCNB2O95067 398 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 NUDT14O95848 222 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 SLC1A3P43003 542 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 FOXK1P85037 733 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 DAG1Q14118 895 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 QPRTQ15274 297 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 ALG10BQ5I7T1 473 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 ZNF770Q6IQ21 691 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 FAHD1Q6P587 224 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 LINC00114Q6XXX2 140 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 ASB18Q6ZVZ8 466 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 LSRQ86X29 649 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 PLCZ1Q86YW0 608 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 OR10G2Q8NGC3 310 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 OR9Q2Q8NGE9 314 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 ZNF563Q8TA94 476 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 DNAJA4Q8WW22 397 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 ACOT11Q8WXI4 607 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 SLC38A4Q969I6 547 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 ZNF426Q9BUY5 554 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 ADAM19Q9H013 955 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 SMURF2Q9HAU4 748 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 C8orf4Q9NR00 106 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 DEPPQ9NTK1 212 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 TAS2R10Q9NYW0 307 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 USE1Q9NZ43 259 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 FBXL2Q9UKC9 423 aa15.38■□□□□ 0.05
TSPAN4-205ENST00000397406 MKRN2OSH3BPM6 223 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 GNB5O14775 395 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 ALPLP05186 524 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 CNR1P21554 472 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 DNASE1L1P49184 302 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 DAPP51397 102 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 ALDH3A2P51648 485 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 DLX5P56178 289 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 LSM11P83369 360 aaKnown RBP eCLIP15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 SRSF1Q07955 248 aaKnown RBP eCLIP15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 ATG4DQ86TL0 474 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 PACS2Q86VP3 889 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 GALNT4Q8N4A0 578 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 TMEM255BQ8WV15 326 aa15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 SMAD5Q99717 465 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 RBM4BQ9BQ04 359 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 RBM4Q9BWF3 364 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-205ENST00000397406 A0A087WUJ7 227 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 ETV2O00321 342 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 DLGAP1O14490 977 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 CDC40O60508 579 aaKnown RBP eCLIP15.36■□□□□ 0.052e-6■■■■■ 31.7
TSPAN4-205ENST00000397406 HPRP00739 348 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 CBLP22681 906 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 AQP4P55087 323 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 KLRB1Q12918 225 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 TIGD3Q6B0B8 471 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 ARSKQ6UWY0 536 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 IZUMO2Q6UXV1 221 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 LINC00471Q8N535 108 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 OR4K17Q8NGC6 315 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 OR4K5Q8NGD3 323 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 OR1J4Q8NGS1 313 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 MAGEE2Q8TD90 523 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 ST8SIA1Q92185 356 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 MPP4Q96JB8 637 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 ZNF597Q96LX8 424 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 FEVQ99581 238 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 COL12A1Q99715 3063 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 TACO1Q9BSH4 297 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 HES7Q9BYE0 225 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 VCXQ9H320 206 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 C12orf10Q9HB07 376 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 MED17Q9NVC6 651 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 TMEFF2Q9UIK5 374 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 FREM3P0C091 2139 aa15.36■□□□□ 0.05
TSPAN4-205ENST00000397406 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.35■□□□□ 0.05
TSPAN4-205ENST00000397406 PINLYPA6NC86 204 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms