RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 FCRLAQ7L513 359 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 SSX8Q7RTT4 187 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 CDC20BQ86Y33 519 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 ZNF610Q8N9Z0 462 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 CKAP2Q8WWK9 683 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 MARK4Q96L34 752 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 NPAS1Q99742 590 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 OPN3Q9H1Y3 402 aaPredicted RBP12.46□□□□□ -0.41
SEC13-204ENST00000397099 SLCO1B3Q9NPD5 702 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 CCM2LQ9NUG4 571 aaPredicted RBP12.46□□□□□ -0.41
SEC13-204ENST00000397099 CHRNA9Q9UGM1 479 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 IFT52Q9Y366 437 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 HDGFL3Q9Y3E1 203 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 GMEB1Q9Y692 573 aa12.46□□□□□ -0.41
SEC13-204ENST00000397099 F8P00451 2351 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 DSPPQ9NZW4 1301 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 C9JVG2 144 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 ZNF208O43345 1280 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 EFNA2O43921 213 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 YES1P07947 543 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 DNASE1P24855 282 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 AGTR1P30556 359 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 FAM27E3Q08E93 113 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 SQLEQ14534 574 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 SYT14P1Q58G82 188 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 BLOC1S3Q6QNY0 202 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 TMPPEQ6ZT21 453 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 ANKFN1Q8N957 763 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 GTF2H4Q92759 462 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 SLC35B4Q969S0 331 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 OR5B2Q96R09 309 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 CCDC106Q9BWC9 280 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 LIME1Q9H400 295 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 BCO1Q9HAY6 547 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 EMC3Q9P0I2 261 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 ST6GALNAC2Q9UJ37 374 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 TRAPPC4Q9Y296 219 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 GPR52Q9Y2T5 361 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 PCDHB14Q9Y5E9 798 aa12.45□□□□□ -0.42
SEC13-204ENST00000397099 CENPVL1A0A0U1RR11 272 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 PRAMEF27A3QJZ7 478 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 CFAP73A6NFT4 308 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 ZNF724A8MTY0 619 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 CLIC1O00299 241 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 CYTIPO60759 359 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 CNOT4O95628 575 aaKnown RBP12.44□□□□□ -0.42
SEC13-204ENST00000397099 PMS2P2O95744 297 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 OPN1LWP04000 364 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 CHRM4P08173 479 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 TFPTP0C1Z6 253 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 BMP2P12643 396 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 CRYGSP22914 178 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 SLC1A3P43003 542 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 POLR2HP52434 150 aaKnown RBP12.44□□□□□ -0.42
SEC13-204ENST00000397099 MVDP53602 400 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 P2RY6Q15077 328 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 PDK3Q15120 406 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 RGNQ15493 299 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 COX20Q5RI15 118 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 LRIF1Q5T3J3 769 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 RNF220Q5VTB9 566 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 METTL21CQ5VZV1 264 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 DNAJC14Q6Y2X3 702 aaPredicted RBP12.44□□□□□ -0.42
SEC13-204ENST00000397099 ZNF550Q7Z398 422 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 ATP6V1C2Q8NEY4 427 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 STEAP2Q8NFT2 490 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 OR9I1Q8NGQ6 314 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 OR52P1PQ8NH57 321 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 PNPT1Q8TCS8 783 aaKnown RBP12.44□□□□□ -0.42
SEC13-204ENST00000397099 TSPEARQ8WU66 669 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 SLC38A5Q8WUX1 472 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 VPS33AQ96AX1 596 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 DDIT4LQ96D03 193 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 MBD6Q96DN6 1003 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 SPDL1Q96EA4 605 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 FOXC2Q99958 501 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 KLHDC3Q9BQ90 382 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 PAIP1Q9H074 479 aaKnown RBP12.44□□□□□ -0.42
SEC13-204ENST00000397099 COQ10BQ9H8M1 238 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 BCL2L10Q9HD36 194 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 A4GALTQ9NPC4 353 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 CCDC167Q9P0B6 97 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 PLEKHA6Q9Y2H5 1048 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 AKAP6Q13023 2319 aa12.44□□□□□ -0.42
SEC13-204ENST00000397099 CDHR4A6H8M9 788 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 EVPLLA8MZ36 301 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 C5orf58C9J3I9 102 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 SULT2B1O00204 365 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 GPR171O14626 319 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 EIF1BO60739 113 aaKnown RBP12.43□□□□□ -0.42
SEC13-204ENST00000397099 RAF1P04049 648 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 HRGP04196 525 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 BCHEP06276 602 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 ETFAP13804 333 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 PSMB1P20618 241 aaKnown RBP12.43□□□□□ -0.42
SEC13-204ENST00000397099 SHC1P29353 583 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 RYKP34925 604 aa12.43□□□□□ -0.42
SEC13-204ENST00000397099 IDH2P48735 452 aaKnown RBP12.43□□□□□ -0.42
SEC13-204ENST00000397099 DIO1P49895 249 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms