RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 HDHD5Q9BXW7 423 aa16.72■□□□□ 0.27
MCF2L-207ENST00000397024 BCO1Q9HAY6 547 aa16.72■□□□□ 0.27
MCF2L-207ENST00000397024 PRSS50Q9UI38 385 aa16.72■□□□□ 0.27
MCF2L-207ENST00000397024 BTNL2Q9UIR0 455 aa16.72■□□□□ 0.27
MCF2L-207ENST00000397024 CSPG4Q6UVK1 2322 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 GOLGA8QA0A0J9YX86 632 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 GOLGA8OA6NCC3 632 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 CCDC154A6NI56 674 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 GOLGA8NF8WBI6 632 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 CYTIPO60759 359 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 SNNO75324 88 aaPredicted RBP16.71■□□□□ 0.27
MCF2L-207ENST00000397024 RYKP34925 604 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 DIO1P49895 249 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 KHKP50053 298 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 SYPL1Q16563 259 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 DPY19L1Q2PZI1 675 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 GPAT3Q53EU6 434 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 C3orf33Q6P1S2 294 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 TMPPEQ6ZT21 453 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.71■□□□□ 0.27
MCF2L-207ENST00000397024 ANKFN1Q8N957 763 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 CNOT9Q92600 299 aaKnown RBP16.71■□□□□ 0.27
MCF2L-207ENST00000397024 DNAJA3Q96EY1 480 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 CCDC106Q9BWC9 280 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 CTPS2Q9NRF8 586 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 POLE3Q9NRF9 147 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 KLHL9Q9P2J3 617 aa16.71■□□□□ 0.27
MCF2L-207ENST00000397024 FN1P02751 2386 aaKnown RBP16.7■□□□□ 0.26
MCF2L-207ENST00000397024 TMEM120BA0PK00 339 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 GSNP06396 782 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 KITP10721 976 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 ADSLP30566 484 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-207ENST00000397024 OR3A2P47893 321 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 NR1H2P55055 460 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 KCNJ10P78508 379 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 COX20Q5RI15 118 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 PRSS57Q6UWY2 283 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 SEZ6L2Q6UXD5 910 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 SPATA19Q7Z5L4 167 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 YTHDF3Q7Z739 585 aaKnown RBP16.7■□□□□ 0.26
MCF2L-207ENST00000397024 ADGRG3Q86Y34 549 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 KIRREL3Q8IZU9 778 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 MGARPQ8TDB4 240 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 TMEM234Q8WY98 164 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 ARL5BQ96KC2 179 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 OR52E6Q96RD3 313 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 SLC38A1Q9H2H9 487 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 SERINC1Q9NRX5 453 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 SLC35A3Q9Y2D2 325 aa16.7■□□□□ 0.26
MCF2L-207ENST00000397024 H7C1Q1 480 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 SULT2B1O00204 365 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 HS3ST1O14792 307 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 HDAC3O15379 428 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 PGRP06401 933 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 FESP07332 822 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 CHRM4P08173 479 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 IL32P24001 234 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 PTH2RP49190 550 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 LTBQ06643 244 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 ITGADQ13349 1161 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 P2RY6Q15077 328 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 SYT14P1Q58G82 188 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 ZNF621Q6ZSS3 439 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 CROCCP2Q86T23 111 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 ZNF611Q8N823 705 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 AKAP1Q92667 903 aaKnown RBP eCLIP16.69■□□□□ 0.261e-6■■■■□ 23.1
MCF2L-207ENST00000397024 KISS1RQ969F8 398 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-207ENST00000397024 ARL8AQ96BM9 186 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 PANX1Q96RD7 426 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 GSX2Q9BZM3 304 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.69■□□□□ 0.26
MCF2L-207ENST00000397024 SLC6A13Q9NSD5 602 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 THAP1Q9NVV9 213 aa16.69■□□□□ 0.26
MCF2L-207ENST00000397024 TRIM64A6NGJ6 449 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 TRIM64BA6NI03 449 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 ZNF724A8MTY0 619 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 AP3D1O14617 1153 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 LYZL6O75951 148 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 LY6G6DO95868 133 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 TFPIP10646 304 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 NTF4P34130 210 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 APOBEC1P41238 236 aaKnown RBP16.68■□□□□ 0.26
MCF2L-207ENST00000397024 MAPK11Q15759 364 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 NCMAPQ5T1S8 102 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 CLEC9AQ6UXN8 241 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 Q6ZT83 130 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 BHLHA15Q7RTS1 189 aaPredicted RBP16.68■□□□□ 0.26
MCF2L-207ENST00000397024 MTDHQ86UE4 582 aaKnown RBP16.68■□□□□ 0.26
MCF2L-207ENST00000397024 ZNF563Q8TA94 476 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 PNPT1Q8TCS8 783 aaKnown RBP16.68■□□□□ 0.26
MCF2L-207ENST00000397024 OIT3Q8WWZ8 545 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 HSD17B8Q92506 261 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 NEUROG1Q92886 237 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 COX4I2Q96KJ9 171 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 TRNT1Q96Q11 434 aaKnown RBP16.68■□□□□ 0.26
MCF2L-207ENST00000397024 TACO1Q9BSH4 297 aaKnown RBP16.68■□□□□ 0.26
MCF2L-207ENST00000397024 OR11A1Q9GZK7 315 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 CHRNA9Q9UGM1 479 aa16.68■□□□□ 0.26
MCF2L-207ENST00000397024 DPRXA6NFQ7 191 aa16.67■□□□□ 0.26
MCF2L-207ENST00000397024 AGAP5A6NIR3 686 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms