RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 CTRCQ99895 268 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 KLHDC3Q9BQ90 382 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 PRO3102Q9H379 93 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 PRODH2Q9UF12 536 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 SIGLEC7Q9Y286 467 aa10.24□□□□□ -0.77
TCOF1-203ENST00000394269 LSM2Q9Y333 95 aaKnown RBP10.24□□□□□ -0.77
TCOF1-203ENST00000394269 MED12Q93074 2177 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 A0A1W2PPK0 400 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ELOA3DA6NLF2 546 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 J3QLW9 94 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 K7ESF4 209 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 SCO2O43819 266 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 NCR1O76036 304 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF19P17023 458 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 RPS4Y1P22090 263 aaKnown RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 MAP3K8P41279 467 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 CRYBB2P43320 205 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 SERTAD2Q14140 314 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ELOA3BQ3SY89 546 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ULK3Q6PHR2 472 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 OGFOD3Q6PK18 319 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 APOOLQ6UXV4 268 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 TMPRSS9Q7Z410 1059 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 MFSD4AQ8N468 514 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 TMEM99Q8N816 258 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ELOA3Q8NG57 546 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 OR6K6Q8NGW6 343 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 SLC2A12Q8TD20 617 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 PTP4A1Q93096 173 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ABCB9Q9NP78 766 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 MKKSQ9NPJ1 570 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 SEC14L4Q9UDX3 406 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 EPHA6Q9UF33 1036 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 STUB1Q9UNE7 303 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 CFL2Q9Y281 166 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 HEATR5AQ86XA9 2040 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 PATE3B3GLJ2 98 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 LOC110117498-PIK3R3F6TDL0 507 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 CASKO14936 926 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 CHP2O43745 196 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 GDF9O60383 454 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 DLGAP3O95886 979 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 IL12BP29460 328 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 OTPQ5XKR4 325 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 UBE2J2Q8N2K1 259 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 EID2Q8N6I1 236 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF615Q8N8J6 731 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 DTX3Q8N9I9 347 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 LMF2Q9BU23 707 aaKnown RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 TXNL4BQ9NX01 149 aaKnown RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 MALT1Q9UDY8 824 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 GMEB2Q9UKD1 530 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 H0YIG0 161 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 SLC30A4O14863 429 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 HCN1O60741 890 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 RORAP35398 523 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ERVK-25P63136 954 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 EFNB1P98172 346 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 SLC3A1Q07837 685 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 MLLT11Q13015 90 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 DSG2Q14126 1118 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 PHF19Q5T6S3 580 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF613Q6PF04 617 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ARL9Q6T311 187 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 RPTNQ6XPR3 784 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 RTL4Q6ZR62 310 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF550Q7Z398 422 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 PARP16Q8N5Y8 322 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 OR6C1Q96RD1 312 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 NUDT9Q9BW91 350 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 GTPBP2Q9BX10 602 aaKnown RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 LANCL2Q9NS86 450 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 COMMD3Q9UBI1 195 aa10.23□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF223Q9UK11 482 aaPredicted RBP10.23□□□□□ -0.77
TCOF1-203ENST00000394269 SDK2Q58EX2 2172 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 ACACAQ13085 2346 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 C4orf47A7E2U8 309 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 DVL2O14641 736 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 POLR1CO15160 346 aaPredicted RBP10.22□□□□□ -0.77
TCOF1-203ENST00000394269 KLF4O43474 513 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 F13BP05160 661 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 ZNF12P17014 697 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 TBXA2RP21731 343 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 ACVR1BP36896 505 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 PRKCDQ05655 676 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 CD300CQ08708 224 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 FUT7Q11130 342 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 C3orf38Q5JPI3 329 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 NXNL2Q5VZ03 156 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 Q6ZNX1 250 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 MARCH3Q86UD3 253 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 RNF113BQ8IZP6 322 aaKnown RBP10.22□□□□□ -0.77
TCOF1-203ENST00000394269 KLHL36Q8N4N3 616 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 ATP6V1C2Q8NEY4 427 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 SLC25A36Q96CQ1 311 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 DCLRE1CQ96SD1 692 aaKnown RBP10.22□□□□□ -0.77
TCOF1-203ENST00000394269 CCDC86Q9H6F5 360 aaKnown RBP10.22□□□□□ -0.77
TCOF1-203ENST00000394269 PRDM9Q9NQV7 894 aa10.22□□□□□ -0.77
TCOF1-203ENST00000394269 H3BSH0 61 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms