RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 Q3ZCU0 254 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 KIAA0895LQ68EN5 471 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 HIST2H2AA3Q6FI13 130 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 PODNL1Q6PEZ8 512 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 SLITRK4Q8IW52 837 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 SFTPA2Q8IWL1 248 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 CFAP206Q8IYR0 622 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 TMEFF1Q8IYR6 380 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 FAM71CQ8NEG0 241 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 HAVCR2Q8TDQ0 301 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 TSACCQ96A04 125 aaPredicted RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 ZNF354BQ96LW1 612 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 RBM14Q96PK6 669 aaKnown RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 EFCAB11Q9BUY7 163 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 FAIM2Q9BWQ8 316 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 TCEAL2Q9H3H9 227 aaPredicted RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 RPS6KB2Q9UBS0 482 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 TINAGQ9UJW2 476 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 FBXL2Q9UKC9 423 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 A4GNTQ9UNA3 340 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 EXOGQ9Y2C4 368 aaKnown RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 TRAV20A0A0B4J274 112 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 A0A1B0GVC2 190 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 SLC5A10A0PJK1 596 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 A6NIN4 97 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 LINC00587B1AMM8 73 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 HNRNPCL2B2RXH8 293 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 C5orf58C9J3I9 102 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 D6RAR5 112 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 GALR3O60755 368 aaPredicted RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 ITGA10O75578 1167 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 SNAPINO95295 136 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 ADRB1P08588 477 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 ACP5P13686 325 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 GSTM3P21266 225 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 PITPNAQ00169 270 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 PDSS1Q5T2R2 415 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 FCRLBQ6BAA4 426 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 IL20RBQ6UXL0 311 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 DEF8Q6ZN54 512 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 SHFQ7M4L6 423 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 COMMD6Q7Z4G1 85 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 TPRA1Q86W33 373 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 RBM45Q8IUH3 476 aaKnown RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 HORMAD2Q8N7B1 307 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 GPR156Q8NFN8 814 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 OR4D11Q8NGI4 311 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 COQ8AQ8NI60 647 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 SLC38A5Q8WUX1 472 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 SPRYD4Q8WW59 207 aaPredicted RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 OR1E3Q8WZA6 343 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 GPA33Q99795 319 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 JAM3Q9BX67 310 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 TMEM121BQ9BXQ6 578 aaPredicted RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 PTGFRNQ9P2B2 879 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 PURGQ9UJV8 347 aaKnown RBP10.32□□□□□ -0.76
CUX1-204ENST00000393824 MKL2Q9ULH7 1088 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 KCNK6Q9Y257 313 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 RASD1Q9Y272 281 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 SLC17A4Q9Y2C5 497 aa10.32□□□□□ -0.76
CUX1-204ENST00000393824 ANXA2P2A6NMY6 339 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 DVL2O14641 736 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 RNF13O43567 381 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 TBX19O60806 448 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 EML2O95834 649 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 WNT1P04628 370 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 GIPP09681 153 aaPredicted RBP10.31□□□□□ -0.76
CUX1-204ENST00000393824 ANKRD34CP0C6C1 535 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 TDGF1P13385 188 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 CPN1P15169 458 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 ATP5A1P25705 553 aaKnown RBP10.31□□□□□ -0.76
CUX1-204ENST00000393824 FNTBP49356 437 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 AKR1D1P51857 326 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 KLF9Q13886 244 aaPredicted RBP10.31□□□□□ -0.76
CUX1-204ENST00000393824 HLXQ14774 488 aaPredicted RBP10.31□□□□□ -0.76
CUX1-204ENST00000393824 PRAMEF14Q5SWL7 426 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 SLC30A6Q6NXT4 461 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 SLC27A4Q6P1M0 643 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 SFXN4Q6P4A7 337 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 Q6ZSR6 202 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 RD3Q7Z3Z2 195 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 FAM98AQ8NCA5 519 aaKnown RBP10.31□□□□□ -0.76
CUX1-204ENST00000393824 OR4K5Q8NGD3 323 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 CNOT9Q92600 299 aaKnown RBP10.31□□□□□ -0.76
CUX1-204ENST00000393824 RFKQ969G6 155 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 NEURL3Q96EH8 262 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 MRPS24Q96EL2 167 aaKnown RBP10.31□□□□□ -0.76
CUX1-204ENST00000393824 SLC19A3Q9BZV2 496 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 ABCG4Q9H172 646 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 C20orf85Q9H1P6 137 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 FN3KQ9H479 309 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 NANSQ9NR45 359 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 COA4Q9NYJ1 87 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 GPR160Q9UJ42 338 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 CHST2Q9Y4C5 530 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 NINQ8N4C6 2090 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 CABIN1Q9Y6J0 2220 aa10.31□□□□□ -0.76
CUX1-204ENST00000393824 A0A1W2PPC4 97 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms