RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 VMP1Q96GC9 406 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 LRFN5Q96NI6 719 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 MGLLQ99685 303 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 WDR77Q9BQA1 342 aaPredicted RBP20.3■□□□□ 0.84
HMGA2-203ENST00000393578 IFT27Q9BW83 186 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 TBL1XR1Q9BZK7 514 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 FN3KQ9H479 309 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 FGF20Q9NP95 211 aaPredicted RBP20.3■□□□□ 0.84
HMGA2-203ENST00000393578 NXT1Q9UKK6 140 aaKnown RBP20.3■□□□□ 0.84
HMGA2-203ENST00000393578 BAIAP2Q9UQB8 552 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 LSM2Q9Y333 95 aaKnown RBP20.3■□□□□ 0.84
HMGA2-203ENST00000393578 OR6C70A6NIJ9 312 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 NDUFB5O43674 189 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 SLC2A10O95528 541 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 KLK3P07288 261 aaPredicted RBP20.3■□□□□ 0.84
HMGA2-203ENST00000393578 HSMCR30P0CW71 290 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 ZNF28P17035 718 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 RGS6P49758 472 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 CDH11P55287 796 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 ZNF117Q03924 483 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 FHL1Q13642 323 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 C3orf38Q5JPI3 329 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 ATG4DQ86TL0 474 aaPredicted RBP20.3■□□□□ 0.84
HMGA2-203ENST00000393578 NANOGP1Q8N7R0 232 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 TNFRSF13CQ96RJ3 184 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 RTN4RQ9BZR6 473 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 RACGAP1Q9H0H5 632 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 CLEC2DQ9UHP7 191 aa20.3■□□□□ 0.84
HMGA2-203ENST00000393578 FAM86C2PA6NEL3 165 aa20.29■□□□□ 0.84
HMGA2-203ENST00000393578 ELOA3DA6NLF2 546 aaPredicted RBP20.29■□□□□ 0.84
HMGA2-203ENST00000393578 EIF4E2O60573 245 aaKnown RBP20.29■□□□□ 0.84
HMGA2-203ENST00000393578 IGF2P01344 180 aa20.29■□□□□ 0.84
HMGA2-203ENST00000393578 ELOA3BQ3SY89 546 aa20.29■□□□□ 0.84
HMGA2-203ENST00000393578 MARCH3Q86UD3 253 aa20.29■□□□□ 0.84
HMGA2-203ENST00000393578 ELOA3Q8NG57 546 aa20.29■□□□□ 0.84
HMGA2-203ENST00000393578 OR8K3Q8NH51 312 aa20.29■□□□□ 0.84
HMGA2-203ENST00000393578 AKIRIN1Q9H9L7 192 aaPredicted RBP20.29■□□□□ 0.84
HMGA2-203ENST00000393578 CMC2Q9NRP2 79 aa20.29■□□□□ 0.84
HMGA2-203ENST00000393578 HCRTR2O43614 444 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 SLC1A3P43003 542 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 SLC9A3P48764 834 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 FOXK2Q01167 660 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 SPHARQ15513 63 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 CXXC5Q7LFL8 322 aaKnown RBP20.28■□□□□ 0.84
HMGA2-203ENST00000393578 CPOQ8IVL8 374 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 AMER2Q8N7J2 671 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 TMEM43Q9BTV4 400 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 MCCC2Q9HCC0 563 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 HINT3Q9NQE9 182 aaKnown RBP20.28■□□□□ 0.84
HMGA2-203ENST00000393578 H2AFY2Q9P0M6 372 aaPredicted RBP20.28■□□□□ 0.84
HMGA2-203ENST00000393578 GPN3Q9UHW5 284 aaPredicted RBP20.28■□□□□ 0.84
HMGA2-203ENST00000393578 NPFFR2Q9Y5X5 522 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.28■□□□□ 0.84
HMGA2-203ENST00000393578 FADS1O60427 444 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 MYL12AP19105 171 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 HTR1FP30939 366 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 SLC6A6P31641 620 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 CCKBRP32239 447 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 EVI2BP34910 448 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 VBP1P61758 197 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 LSM3P62310 102 aaKnown RBP20.28■□□□□ 0.84
HMGA2-203ENST00000393578 GID4Q8IVV7 300 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 SH3YL1Q96HL8 342 aaPredicted RBP20.28■□□□□ 0.84
HMGA2-203ENST00000393578 C12orf10Q9HB07 376 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 SLC24A3Q9HC58 644 aa20.28■□□□□ 0.84
HMGA2-203ENST00000393578 ZBTB20Q9HC78 741 aaPredicted RBP20.28■□□□□ 0.84
HMGA2-203ENST00000393578 A0A0C4DFX4 3053 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 IGKV1D-42A0A075B6H8 117 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 AIREO43918 545 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 MST1P26927 711 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 EFR3AQ14156 821 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 SLC35F1Q5T1Q4 408 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 OR5L2Q8NGL0 311 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 ZNF563Q8TA94 476 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 RPL3LQ92901 407 aaKnown RBP20.27■□□□□ 0.84
HMGA2-203ENST00000393578 ULBP3Q9BZM4 244 aa20.27■□□□□ 0.84
HMGA2-203ENST00000393578 TRBV11-1A0A0K0K1C0 115 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 B4E171 279 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 MYL12BO14950 172 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 CSO75390 466 aaKnown RBP20.26■□□□□ 0.83
HMGA2-203ENST00000393578 SCG5P05408 212 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 PEPDP12955 493 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 GADD45AP24522 165 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 TSPAN7P41732 249 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 C1DQ13901 141 aaKnown RBP20.26■□□□□ 0.83
HMGA2-203ENST00000393578 BBS1Q8NFJ9 593 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 CMKLR1Q99788 373 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 TAPBPLQ9BX59 468 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 ADAM19Q9H013 955 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 CHCHD3Q9NX63 227 aaKnown RBP20.26■□□□□ 0.83
HMGA2-203ENST00000393578 SLC39A1Q9NY26 324 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 ZNF337Q9Y3M9 751 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 M0R3G1 203 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 CCRL2O00421 344 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 NDUFB2O95178 105 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 CDK4P11802 303 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 ETV5P41161 510 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 ETV1P50549 477 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 SLC26A5P58743 744 aa20.26■□□□□ 0.83
HMGA2-203ENST00000393578 NCS1P62166 190 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms