RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 SNX29P2Q8IUI4 249 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 GRAMD2AQ8IUY3 354 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 GALNT6Q8NCL4 622 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 RORBQ92753 470 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 MR1Q95460 341 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 TXNDC15Q96J42 360 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 TNFRSF13CQ96RJ3 184 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 NPAS1Q99742 590 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 OR52D1Q9H346 318 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 ANKRD19PQ9H560 264 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 HHATLQ9HCP6 504 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 HRH3Q9Y5N1 445 aa13.7□□□□□ -0.22
MKS1-202ENST00000393119 TSPAN2O60636 221 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 LIPAP38571 399 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 SKP2Q13309 424 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 SOWAHCQ53LP3 525 aaPredicted RBP13.69□□□□□ -0.22
MKS1-202ENST00000393119 SLC29A4Q7RTT9 530 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 GHDCQ8N2G8 530 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 ZNF441Q8N8Z8 693 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 OR6Q1Q8NGQ2 317 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 ZNF582Q96NG8 517 aaPredicted RBP13.69□□□□□ -0.22
MKS1-202ENST00000393119 HCAR1Q9BXC0 346 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 PLCXD1Q9NUJ7 323 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 IL20Q9NYY1 176 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 TRBV11-1A0A0K0K1C0 115 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 A0A1W2PNU3 283 aaPredicted RBP13.69□□□□□ -0.22
MKS1-202ENST00000393119 UNC119BA6NIH7 251 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 C4orf47A7E2U8 309 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 GTPBP1O00178 669 aaKnown RBP13.69□□□□□ -0.22
MKS1-202ENST00000393119 SCDO00767 359 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 IMPA2O14732 288 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 CHP2O43745 196 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 HSMCR30P0CW71 290 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 GSTM3P21266 225 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 IL12BP29460 328 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 IFNGR2P38484 337 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 SMSP52788 366 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 RPS18P62269 152 aaKnown RBP13.69□□□□□ -0.22
MKS1-202ENST00000393119 ZNF117Q03924 483 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 ZNF91Q05481 1191 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 FHL1Q13642 323 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 INAQ16352 499 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 MRPL14Q6P1L8 145 aaKnown RBP13.69□□□□□ -0.22
MKS1-202ENST00000393119 NANOGNBQ7Z5D8 188 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 CHAC2Q8WUX2 184 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 C3orf49Q96BT1 292 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 HOXD1Q9GZZ0 328 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 UBQLN3Q9H347 655 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 SLC39A1Q9NY26 324 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 NUP210LQ5VU65 1888 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 LOC400499M0QZD8 3231 aa13.69□□□□□ -0.22
MKS1-202ENST00000393119 LRRTM2O43300 516 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 UBL4AP11441 157 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 ACP1P24666 158 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 SLC9A3P48764 834 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 SNRPGP62308 76 aaKnown RBP13.68□□□□□ -0.22
MKS1-202ENST00000393119 PRKCDQ05655 676 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 BIKQ13323 160 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 DNASE1L3Q13609 305 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 ZNF613Q6PF04 617 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 LINC00471Q8N535 108 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 LSMEM1Q8N8F7 131 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 OR8J1Q8NGP2 316 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 FANK1Q8TC84 345 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 SMAP2Q8WU79 429 aaPredicted RBP13.68□□□□□ -0.22
MKS1-202ENST00000393119 METTL21AQ8WXB1 218 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 CPNE5Q9HCH3 593 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 GALNT9Q9HCQ5 603 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 ENOPH1Q9UHY7 261 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 FBXL4Q9UKA2 621 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 MED31Q9Y3C7 131 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 LAMA5O15230 3695 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 PCNX3Q9H6A9 2034 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 CFAP47Q6ZTR5 3102 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 SOCS6O14544 535 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 SLC22A1O15245 554 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 HCRTR2O43614 444 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 FMO6PO60774 539 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 CPNE3O75131 537 aaKnown RBP13.68□□□□□ -0.22
MKS1-202ENST00000393119 UMODP07911 640 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 ADORA3P0DMS8 318 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 DBTP11182 482 aaKnown RBP13.68□□□□□ -0.22
MKS1-202ENST00000393119 GRK5P34947 590 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 STAT5AP42229 794 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 SLC15A1P46059 708 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 TPTEP56180 551 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 IPCEF1Q8WWN9 437 aaPredicted RBP13.68□□□□□ -0.22
MKS1-202ENST00000393119 NACC2Q96BF6 587 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 POLDIP3Q9BY77 421 aaKnown RBP13.68□□□□□ -0.22
MKS1-202ENST00000393119 RNF167Q9H6Y7 350 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 SP140LQ9H930 580 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 RPS6KB2Q9UBS0 482 aa13.68□□□□□ -0.22
MKS1-202ENST00000393119 RBMX2Q9Y388 322 aaKnown RBP13.68□□□□□ -0.22
MKS1-202ENST00000393119 IGKV1D-42A0A075B6H8 117 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 SAGE2PA6NJ88 616 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 SURF4O15260 269 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 CLUP10909 449 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 CD79BP40259 229 aa13.67□□□□□ -0.22
MKS1-202ENST00000393119 INPP5JQ15735 1006 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms