RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 DUSP19Q8WTR2 217 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 SPTSSAQ969W0 71 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 LMF1Q96S06 567 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF224Q9NZL3 707 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 A0A1B0GX78 115 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 YY2O15391 372 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 SLC2A5P22732 501 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 SPCS2Q15005 226 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 TRMT12Q53H54 448 aaKnown RBP15.41■□□□□ 0.06
SCN3B-202ENST00000392770 TIGD4Q8IY51 512 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF582Q96NG8 517 aaPredicted RBP15.41■□□□□ 0.06
SCN3B-202ENST00000392770 PPIL1Q9Y3C6 166 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 WASH6PQ9NQA3 447 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 SLC17A4Q9Y2C5 497 aa15.41■□□□□ 0.06
SCN3B-202ENST00000392770 GGT3PA6NGU5 568 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 H2AFB2P0C5Z0 115 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 MLLT11Q13015 90 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-202ENST00000392770 STACQ99469 402 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 SLC6A7Q99884 636 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 NUDT15Q9NV35 164 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 CD3GP09693 182 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 CA5AP35218 305 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 GPLD1P80108 840 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 HRASLS5Q96KN8 279 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 TNFRSF13CQ96RJ3 184 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 IRF2BPLQ9H1B7 796 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 MEPEQ9NQ76 525 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-202ENST00000392770 MYEF2Q9P2K5 600 aaKnown RBP15.4■□□□□ 0.06
SCN3B-202ENST00000392770 FTCDNL1E5RQL4 147 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 RAD51DO75771 328 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 BSGP35613 385 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 CSNK1A1P48729 337 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 SNU13P55769 128 aaKnown RBP15.4■□□□□ 0.06
SCN3B-202ENST00000392770 ACSM3Q53FZ2 586 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 NUDT22Q9BRQ3 303 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 ZNF160Q9HCG1 818 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 POLE3Q9NRF9 147 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 A0A1W2PPC4 97 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 PRH1P02810 166 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 VASNQ6EMK4 673 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 SEMA4GQ9NTN9 838 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 POLHQ9Y253 713 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 HSPA12AO43301 675 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 PIGAP37287 484 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 UBE2NP61088 152 aaKnown RBP15.4■□□□□ 0.06
SCN3B-202ENST00000392770 EEF1A1P68104 462 aaKnown RBP15.4■□□□□ 0.06
SCN3B-202ENST00000392770 POU3F1Q03052 451 aaPredicted RBP15.4■□□□□ 0.06
SCN3B-202ENST00000392770 NTRK2Q16620 822 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 SLC6A20Q9NP91 592 aa15.4■□□□□ 0.06
SCN3B-202ENST00000392770 GALR3O60755 368 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 DUSP5Q16690 384 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 GPR139Q6DWJ6 353 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 CCBE1Q6UXH8 406 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 GPR148Q8TDV2 347 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 ABCG5Q9H222 651 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 MED17Q9NVC6 651 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 PSORS1C1Q9UIG5 152 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 A0A1B0GWA3 101 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 AMY2BP19961 511 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 FXYD6P3P58550 94 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 OR2G6Q5TZ20 316 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 ZNF704Q6ZNC4 412 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 RBM45Q8IUH3 476 aaKnown RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 HAVCR2Q8TDQ0 301 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 ZNF16P17020 682 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 LCN1P31025 176 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 ILKQ13418 452 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 CNIH2Q6PI25 160 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 ZNF322Q6U7Q0 402 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 RCBTB1Q8NDN9 531 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 CCDC120Q96HB5 630 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 FAM71F1Q96KD3 344 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 NAA50Q9GZZ1 169 aaKnown RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 GSTT2P0CG29 244 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 RSU1Q15404 277 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 KDM4DQ6B0I6 523 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 CCNL2Q96S94 520 aaPredicted RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 RPP25Q9BUL9 199 aaKnown RBP15.39■□□□□ 0.05
SCN3B-202ENST00000392770 F5H5K5 113 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 IGHEP01854 428 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 SELENOVP59797 346 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 PRAMEF20Q5VT98 475 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 MISPQ8IVT2 679 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 BABAM2Q9NXR7 383 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 FBXL3Q9UKT7 428 aa15.39■□□□□ 0.05
SCN3B-202ENST00000392770 CENPBD1B2RD01 187 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 PRPH2P23942 346 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 SSR4P51571 173 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 PRKXP51817 358 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 FOXK1P85037 733 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 SQSTM1Q13501 440 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 BORAQ6PGQ7 559 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 Q6ZS52 159 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 MARCH3Q86UD3 253 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 NANOS1Q8WY41 292 aaKnown RBP15.38■□□□□ 0.05
SCN3B-202ENST00000392770 PITPNBP48739 271 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 SMAD2Q15796 467 aaKnown RBP15.38■□□□□ 0.05
SCN3B-202ENST00000392770 TP53I13Q8NBR0 393 aaPredicted RBP15.38■□□□□ 0.05
SCN3B-202ENST00000392770 KATNB1Q9BVA0 655 aa15.38■□□□□ 0.05
SCN3B-202ENST00000392770 H7C1C5 153 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms