RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 CFAP73A6NFT4 308 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 TUBAL3A6NHL2 446 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 DNPH1O43598 174 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 EFNA2O43921 213 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SMNDC1O75940 238 aaKnown RBP eCLIP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 VIMP08670 466 aaKnown RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 ARAFP10398 606 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 ETS2P15036 469 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SHC1P29353 583 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 RYKP34925 604 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 ARFIP2P53365 341 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 RAC3P60763 192 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 CSNK2A1P68400 391 aaPredicted RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SIRPAP78324 504 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 MRPL2Q5T653 305 aaKnown RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 VWA1Q6PCB0 445 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF550Q7Z398 422 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 DHDDSQ86SQ9 333 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 MSRB3Q8IXL7 192 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SLC43A2Q8N370 569 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 LURAP1Q96LR2 239 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SLC39A3Q9BRY0 314 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 SPATA9Q9BWV2 254 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 ELOVL5Q9NYP7 299 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 VAPAQ9P0L0 249 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 CHRNA9Q9UGM1 479 aa11.35□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF443Q9Y2A4 671 aaPredicted RBP11.35□□□□□ -0.59
GGPS1-203ENST00000391855 CLDN24A6NM45 220 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 BCAS1O75363 584 aaPredicted RBP11.34□□□□□ -0.59
GGPS1-203ENST00000391855 OPN1LWP04000 364 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 GPX2P18283 190 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 CPOXP36551 454 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 CD79BP40259 229 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 PLAURQ03405 335 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 EPS8Q12929 822 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 MAPRE2Q15555 327 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 SYT14P1Q58G82 188 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF836Q6ZNA1 936 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 FCRLAQ7L513 359 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 BTLAQ7Z6A9 289 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 STK32CQ86UX6 486 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 KRT73Q86Y46 540 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 ATP6V1C2Q8NEY4 427 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 ZHX1-C8orf76Q96EF9 292 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 SPATA5L1Q9BVQ7 753 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 CCDC106Q9BWC9 280 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 TMEM38AQ9H6F2 299 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 KLHL9Q9P2J3 617 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 HDGFL3Q9Y3E1 203 aa11.34□□□□□ -0.59
GGPS1-203ENST00000391855 HEATR5AQ86XA9 2040 aa11.33□□□□□ -0.59
GGPS1-203ENST00000391855 ZNF208O43345 1280 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 PGM3O95394 542 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 CGAP01215 116 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 EPXP11678 715 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 ADSLP30566 484 aaPredicted RBP11.33□□□□□ -0.6
GGPS1-203ENST00000391855 MDH1P40925 334 aaKnown RBP11.33□□□□□ -0.6
GGPS1-203ENST00000391855 SLC1A3P43003 542 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 IDH2P48735 452 aaKnown RBP11.33□□□□□ -0.6
GGPS1-203ENST00000391855 POLR2HP52434 150 aaKnown RBP11.33□□□□□ -0.6
GGPS1-203ENST00000391855 COPZ1P61923 177 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 CDK6Q00534 326 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 GUCY1A3Q02108 690 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 DAZAP2Q15038 168 aaPredicted RBP11.33□□□□□ -0.6
GGPS1-203ENST00000391855 COQ5Q5HYK3 327 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 TMEM201Q5SNT2 666 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 REEP3Q6NUK4 255 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 DLEU7Q6UYE1 221 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 TMPPEQ6ZT21 453 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 HMGN2P46Q86SG4 172 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 VRK2Q86Y07 508 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 ZZZ3Q8IYH5 903 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 ZNF524Q96C55 264 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 DACH2Q96NX9 599 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 OR5B2Q96R09 309 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 CGREF1Q99674 301 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 CPPED1Q9BRF8 314 aaPredicted RBP11.33□□□□□ -0.6
GGPS1-203ENST00000391855 SRXN1Q9BYN0 137 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 CTPS2Q9NRF8 586 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 CRIM1Q9NZV1 1036 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 SLAMF8Q9P0V8 285 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 KLHL14Q9P2G3 628 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 KLHL13Q9P2N7 655 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 NDRG3Q9UGV2 375 aa11.33□□□□□ -0.6
GGPS1-203ENST00000391855 NAV2Q8IVL1 2488 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 MAST4O15021 2626 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 BBIP1A8MTZ0 92 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 SLC22A2O15244 555 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 PRKD3O94806 890 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 POU2F1P14859 743 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 ENPP1P22413 925 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 AGTR1P30556 359 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 PRKAR1BP31321 381 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 RBBP4Q09028 425 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 NFYCQ13952 458 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 RUNDC3AQ59EK9 446 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 ZNF311Q5JNZ3 666 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 RPS26P11Q5JNZ5 115 aaPredicted RBP11.32□□□□□ -0.6
GGPS1-203ENST00000391855 WBP2NLQ6ICG8 309 aa11.32□□□□□ -0.6
GGPS1-203ENST00000391855 TMEM200AQ86VY9 491 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms