RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 PGLYRP4Q96LB8 373 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 CCDC114Q96M63 670 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 THUMPD3Q9BV44 507 aaKnown RBP0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 TEKT3Q9BXF9 490 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 NFKBIZQ9BYH8 718 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 POLD4Q9HCU8 107 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZCCHC3Q9NUD5 404 aaKnown RBP0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 EXD2Q9NVH0 621 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNRD1Q9P1U0 126 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 XPO7Q9UIA9 1087 aaKnown RBP0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 CRLS1Q9UJA2 301 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF222Q9UK12 451 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 TTLL3Q9Y4R7 772 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SHANK1Q9Y566 2161 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 MUC5ACP98088 5654 aa0.34□□□□□ -2.36
RNU6-1228P-201ENST00000391014 HSFX4A0A1B0GTS1 333 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 A0A1B0GWB2 263 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 HSFX3A0A1B0GWH4 333 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 C5orf51A6NDU8 294 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF850A8MQ14 1090 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 CACNB4O00305 520 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 FCN1O00602 326 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 CASKO14936 926 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 RBFOX2O43251 390 aaKnown RBP eCLIP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 NME2P1O60361 137 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 JAK2O60674 1132 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 IGLV6-57P01721 117 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 UQCRFS1P1P0C7P4 283 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 NUMBP49757 651 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 GZMMP51124 257 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 KPNA2P52292 529 aaKnown RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 CASP9P55211 416 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SELENOTP62341 195 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SRYQ05066 204 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF763Q0D2J5 394 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF816Q0VGE8 651 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SMARCB1Q12824 385 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 BAMBIQ13145 260 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 TFDP1Q14186 410 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 BTG3Q14201 252 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SLMAPQ14BN4 828 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 MEP1BQ16820 701 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZSWIM7Q19AV6 140 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 RFX4Q33E94 735 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 AGKQ53H12 422 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 KLF17Q5JT82 389 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 C1orf94Q6P1W5 598 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 B3GLCTQ6Y288 498 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF620Q6ZNG0 422 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 H2AFVQ71UI9 128 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ARFGAP2Q8N6H7 521 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 C15orf56Q8N910 161 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 TMEM104Q8NE00 496 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 OR6C4Q8NGE1 309 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 WDR36Q8NI36 951 aaKnown RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 RTN4IP1Q8WWV3 396 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ARPC1AQ92747 370 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 MS4A14Q96JA4 679 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ELMO2Q96JJ3 720 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 KLHDC3Q9BQ90 382 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ECSITQ9BQ95 431 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 TM2D3Q9BRN9 247 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 NDUFAF3Q9BU61 184 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF416Q9BWM5 594 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF717Q9BY31 904 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 FRMD8P1Q9BZ68 369 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 OSBPL8Q9BZF1 889 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF385DQ9H6B1 395 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 RPAP3Q9H6T3 665 aaPredicted RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF355PQ9NSJ1 428 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 B3GNT2Q9NY97 397 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 UTP6Q9NYH9 597 aaKnown RBP0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 CNIH4Q9P003 139 aa0.33□□□□□ -2.36
RNU6-1228P-201ENST00000391014 PTPRTO14522 1441 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SVILO95425 2214 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 A0A1W2PNN7 141 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 TTC26A0AVF1 554 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 A4D1N5 150 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 CCDC69A6NI79 296 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 E9PBE3 544 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SUPT3HO75486 399 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SRP72O76094 671 aaKnown RBP0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 HSPA4LO95757 839 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 APOA4P06727 396 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 LINC00869P0C866 280 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 UBTFL1P0CB47 393 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 ZNF18P17022 549 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 TSPAN8P19075 237 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 OMGP23515 440 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 MARCKSP29966 332 aaPredicted RBP0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SNU13P55769 128 aaKnown RBP0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SSTP61278 116 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 TSPY1Q01534 308 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 HMGCS1Q01581 520 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SLC39A12Q504Y0 691 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 LRRC10Q5BKY1 277 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 HECTD3Q5T447 861 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SPINT4Q6UDR6 99 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 FAM47EQ6ZV65 393 aa0.32□□□□□ -2.36
RNU6-1228P-201ENST00000391014 SNX32Q86XE0 403 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms