RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ANKRD20A1Q5TYW2 823 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 ANKRD20A3Q5VUR7 823 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 OR8G2PQ6IF36 304 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 SLC39A4Q6P5W5 647 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 SPNS3Q6ZMD2 512 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 ADM2Q7Z4H4 148 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 AMZ2Q86W34 360 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 GPBP1Q86WP2 473 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 ZNF683Q8IZ20 524 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 OR4A16Q8NH70 328 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 PAQR8Q8TEZ7 354 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 CORO2AQ92828 525 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 CCDC51Q96ER9 411 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 TMEM121Q9BTD3 319 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 MLPHQ9BV36 600 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 SPATA16Q9BXB7 569 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 FAM124BQ9H5Z6 455 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 SMPD3Q9NY59 655 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 B3GNT2Q9NY97 397 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 GHRLQ9UBU3 117 aa-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 XPO7Q9UIA9 1087 aaKnown RBP-0.14□□□□□ -2.43
RNU6-239P-201ENST00000390990 MALRD1Q5VYJ5 2156 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 FCN1O00602 326 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 TTI1O43156 1089 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 ECI2O75521 394 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 SERPINA2P20848 420 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 SLC26A3P40879 764 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 GDI2P50395 445 aaKnown RBP-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 ZNF41P51814 821 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 STARD6P59095 220 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 DEFB103AP81534 67 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 PLD1Q13393 1074 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 ACSF3Q4G176 576 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 VAX1Q5SQQ9 334 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 KCTD11Q693B1 232 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 SPINT4Q6UDR6 99 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 UNQ9165/PRO28630Q6UXU0 137 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 TMIGD1Q6UXZ0 262 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 ZNF562Q6V9R5 426 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 ACOT7LQ6ZUV0 252 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 C1orf186Q6ZWK4 172 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 CYS1Q717R9 158 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 SNX32Q86XE0 403 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 CCDC83Q8IWF9 413 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 CCNYQ8ND76 341 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 CCDC54Q8NEL0 328 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 OR10G4Q8NGN3 311 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 BRSK1Q8TDC3 778 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 ADIPOR1Q96A54 375 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 TMEM45BQ96B21 275 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 CELF6Q96J87 481 aaKnown RBP-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 ZNF560Q96MR9 790 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 RAB3IPQ96QF0 476 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 ROGDIQ9GZN7 287 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 TRIM45Q9H8W5 580 aaPredicted RBP-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 MAGEF1Q9HAY2 307 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 TUFT1Q9NNX1 390 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 GALPQ9UBC7 116 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 PCYOX1Q9UHG3 505 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 SCN4AP35499 1836 aa-0.15□□□□□ -2.43
RNU6-239P-201ENST00000390990 RPAP1Q9BWH6 1393 aaPredicted RBP-0.16□□□□□ -2.43
RNU6-239P-201ENST00000390990 IGHV3OR16-8A0A075B7F1 116 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 IGKV1D-43A0A0B4J1Z2 117 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 IGHV3-66A0A0C4DH42 116 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 HSFX4A0A1B0GTS1 333 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 HSFX3A0A1B0GWH4 333 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 A6NIZ1 184 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 SPECC1L-ADORA2AF8WAN1 911 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 CRCPO75575 148 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 LGI1O95970 557 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 XRCC1P18887 633 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 NMT1P30419 496 aaKnown RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 FUSP35637 526 aaKnown RBP eCLIP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 ARRB1P49407 418 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 KPNA2P52292 529 aaKnown RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 PLK1P53350 603 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 DLX1P56177 255 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 RAP1BP61224 184 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 MRPS6P82932 125 aaKnown RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 SRYQ05066 204 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 CHRNB3Q05901 458 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 SMARCB1Q12824 385 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 LIPNQ5VXI9 398 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 BRINP3Q76B58 766 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 BNIPLQ7Z465 357 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 NET1Q7Z628 596 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 ZSCAN30Q86W11 494 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 VSIG1Q86XK7 387 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 SPANXA2-OT1Q8N9U9 137 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 OR4F15Q8NGB8 312 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 OR9G1Q8NH87 305 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 FAM162AQ96A26 154 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 TM4SF19Q96DZ7 209 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 CITED1Q99966 193 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 GAL3ST1Q99999 423 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 TXLNGYQ9BZA5 131 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 DDX47Q9H0S4 455 aaKnown RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 DHX35Q9H5Z1 703 aaKnown RBP-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 C12orf10Q9HB07 376 aa-0.16□□□□□ -2.44
RNU6-239P-201ENST00000390990 ZFP14Q9HCL3 533 aa-0.16□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms