RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PRPH2P23942 346 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 TMEM35AQ53FP2 167 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 GLT8D1Q68CQ7 371 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 PARS2Q7L3T8 475 aaKnown RBP13.3□□□□□ -0.28
RTF1-201ENST00000389629 SLAIN1Q8ND83 568 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 OR5AK2Q8NH90 309 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 TM4SF18Q96CE8 201 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 ASB6Q9NWX5 421 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 STK25O00506 426 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 TGM5O43548 720 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 ADAMTS4O75173 837 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 SPARCP09486 303 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 UBBP0CG47 229 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 UBCP0CG48 685 aaKnown RBP13.3□□□□□ -0.28
RTF1-201ENST00000389629 SEC13P55735 322 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 ALG10BQ5I7T1 473 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 SMAP2Q8WU79 429 aaPredicted RBP13.3□□□□□ -0.28
RTF1-201ENST00000389629 BPIFA2Q96DR5 249 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 OR7D2Q96RA2 312 aa13.3□□□□□ -0.28
RTF1-201ENST00000389629 B3GALNT1O75752 331 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 FGF18O76093 207 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 LUMP51884 338 aaPredicted RBP13.29□□□□□ -0.28
RTF1-201ENST00000389629 AMZ1Q400G9 498 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 FBXO42Q6P3S6 717 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
RTF1-201ENST00000389629 TCEAL8Q8IYN2 117 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 LNX2Q8N448 690 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 ACOT4Q8N9L9 421 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 OR13C2Q8NGS9 318 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 WDFY2Q96P53 400 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 OR1A2Q9Y585 309 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 IGLON5A6NGN9 336 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 PLA2G10O15496 165 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 CHP2O43745 196 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 RGS19P49795 217 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 TNFRSF17Q02223 184 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 MAPK14Q16539 360 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 VASNQ6EMK4 673 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 UNQ6126/PRO20091Q6UXV3 157 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 DPPA4Q7L190 304 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 CPXM2Q8N436 756 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 BBS1Q8NFJ9 593 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 TRMT2BQ96GJ1 504 aaKnown RBP13.29□□□□□ -0.28
RTF1-201ENST00000389629 PFDN5Q99471 154 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 SLC46A2Q9BY10 475 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 GPN3Q9UHW5 284 aaPredicted RBP13.29□□□□□ -0.28
RTF1-201ENST00000389629 HS3ST2Q9Y278 367 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 ZNF878C9JN71 531 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 LCMT2O60294 686 aaKnown RBP13.29□□□□□ -0.28
RTF1-201ENST00000389629 RAD52P43351 418 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 MAP2K6P52564 334 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 TPBGQ13641 420 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 ZC3H14Q6PJT7 736 aaKnown RBP13.29□□□□□ -0.28
RTF1-201ENST00000389629 MFSD8Q8NHS3 518 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 HCFC1R1Q9NWW0 138 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 CAMK2AQ9UQM7 478 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 A0A087WUU8 490 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 PLPP1O14494 284 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 ZNF750Q32MQ0 723 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 CDONQ4KMG0 1287 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 CLLU1Q5K131 121 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 LEG1Q6P5S2 330 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 ABI3BPQ7Z7G0 1075 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 CD163Q86VB7 1156 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 PRSS58Q8IYP2 241 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 OR13C5Q8NGS8 318 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 CDS1Q92903 461 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 DTD2Q96FN9 168 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 SGIP1Q9BQI5 828 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 FTSJ1Q9UET6 329 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 SLC6A5Q9Y345 797 aa13.29□□□□□ -0.28
RTF1-201ENST00000389629 TEX13DA0A0J9YY54 714 aaPredicted RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 APEHP13798 732 aaKnown RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 HTR1FP30939 366 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 ACTBP60709 375 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 ACTG1P63261 375 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.28□□□□□ -0.284e-9■■□□□ 11.8
RTF1-201ENST00000389629 ENPP7Q6UWV6 458 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 STEAP2Q8NFT2 490 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 PHOSPHO1Q8TCT1 267 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 TMEM255BQ8WV15 326 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 FBXW5Q969U6 566 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 GPR174Q9BXC1 333 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 GLIPR2Q9H4G4 154 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 ACSS1Q9NUB1 689 aaPredicted RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 DCDC2BA2VCK2 349 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 MAGEB4O15481 346 aaPredicted RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 PTBP1P26599 531 aaKnown RBP eCLIP13.28□□□□□ -0.282e-8■■■■■ 29.5
RTF1-201ENST00000389629 CCR9P51686 369 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 CLDN2P57739 230 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 SEC61A1P61619 476 aaKnown RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 PDGFRLQ15198 375 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 ABHD13Q7L211 337 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 TMEM99Q8N816 258 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 OR52I2Q8NH67 350 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 MTIF3Q9H2K0 278 aaKnown RBP13.28□□□□□ -0.28
RTF1-201ENST00000389629 WRBO00258 174 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 ATP1B1P05026 303 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 AKAIN1P0CW23 69 aa13.28□□□□□ -0.28
RTF1-201ENST00000389629 RAB28P51157 221 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms