RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 HEPHL1Q6MZM0 1159 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 SRFBP1Q8NEF9 429 aaKnown RBP15.03■□□□□ -0
NKX3-1-201ENST00000380871 DACT3Q96B18 629 aaPredicted RBP15.03■□□□□ -0
NKX3-1-201ENST00000380871 MOAP1Q96BY2 351 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 C10orf90Q96M02 699 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 MRPL15Q9P015 296 aaKnown RBP15.03■□□□□ -0
NKX3-1-201ENST00000380871 CYP8B1Q9UNU6 501 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 CDC123O75794 336 aaPredicted RBP15.03■□□□□ -0
NKX3-1-201ENST00000380871 MT-ND4P03905 459 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 RBMS1P29558 406 aaKnown RBP15.03■□□□□ -0
NKX3-1-201ENST00000380871 PYCR1P32322 319 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 TMEM44Q2T9K0 475 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 MRPL2Q5T653 305 aaKnown RBP15.03■□□□□ -0
NKX3-1-201ENST00000380871 CDC73Q6P1J9 531 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 FIGNL1Q6PIW4 674 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 TAF8Q7Z7C8 310 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 GID4Q8IVV7 300 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 OR8H3Q8N146 312 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 SIX5Q8N196 739 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 LRRC17Q8N6Y2 441 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 OR51L1Q8NGJ5 315 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 GRHL3Q8TE85 626 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 CLIP3Q96DZ5 547 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 SCMH1Q96GD3 660 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 PGLYRP3Q96LB9 341 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 CD180Q99467 661 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 TEAD3Q99594 435 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 PIGUQ9H490 435 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 KIR3DX1Q9H7L2 352 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 HRASLS2Q9NWW9 162 aa15.03■□□□□ -0
NKX3-1-201ENST00000380871 ZNF223Q9UK11 482 aaPredicted RBP15.03■□□□□ -0
NKX3-1-201ENST00000380871 TPD52L2O43399 206 aaKnown RBP15.02■□□□□ -0
NKX3-1-201ENST00000380871 SAGP10523 405 aaPredicted RBP15.02■□□□□ -0
NKX3-1-201ENST00000380871 PER3P56645 1201 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 EEF1A1P68104 462 aaKnown RBP15.02■□□□□ -0
NKX3-1-201ENST00000380871 FOXK2Q01167 660 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 ZNF85Q03923 595 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 CRMP1Q14194 572 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 EXOSC7Q15024 291 aaKnown RBP15.02■□□□□ -0
NKX3-1-201ENST00000380871 ZNF425Q6IV72 752 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 ZNF687Q8N1G0 1237 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 FAM160A2Q8N612 972 aaPredicted RBP15.02■□□□□ -0
NKX3-1-201ENST00000380871 OR52L1Q8NGH7 329 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 MED30Q96HR3 178 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 HS6ST2Q96MM7 605 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 CDCA3Q99618 268 aaPredicted RBP15.02■□□□□ -0
NKX3-1-201ENST00000380871 FOLH1BQ9HBA9 442 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 ACTR10Q9NZ32 417 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 CALML5Q9NZT1 146 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 CD207Q9UJ71 328 aa15.02■□□□□ -0
NKX3-1-201ENST00000380871 TEX13CA0A0J9YWL9 993 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 TCRBP04435 133 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 CTSBP07858 339 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 STOMP27105 288 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 ILF3Q12906 894 aaKnown RBP eCLIP15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 OR1Q1Q15612 314 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 TOR2AQ5JU69 321 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 BICRALQ6AI39 1079 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 PAQR7Q86WK9 346 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 CCDC28AQ8IWP9 274 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 BRIX1Q8TDN6 353 aaKnown RBP15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 TMEM239Q8WW34 195 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 MS4A4EQ96PG1 132 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 SDF2Q99470 211 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 NDC1Q9BTX1 674 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 WSB2Q9NYS7 404 aaPredicted RBP15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 STMN3Q9NZ72 180 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 COQ3Q9NZJ6 369 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 OR6C2Q9NZP2 312 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 HEBP2Q9Y5Z4 205 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 ATF1P18846 271 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 DRD5P21918 477 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 HNRNPA2B1P22626 353 aaKnown RBP15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 VSX2P58304 361 aaPredicted RBP15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 BTG1P62324 171 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 SHC2P98077 582 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 ACSM3Q53FZ2 586 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 Q6ZS52 159 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 GHSRQ92847 366 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 YIPF5Q969M3 257 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 AHCYL2Q96HN2 611 aaKnown RBP15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 JAM3Q9BX67 310 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 NARFLQ9H6Q4 476 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 AUNIPQ9H7T9 357 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 MTHFD2LQ9H903 347 aaPredicted RBP15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 ADGRL4Q9HBW9 690 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 TMEM5Q9Y2B1 443 aa15.02□□□□□ -0.01
NKX3-1-201ENST00000380871 TOXO94900 526 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 PPP1R3DO95685 299 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 MT-ND5P03915 603 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 ADRB1P08588 477 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 BMP7P18075 431 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 LSSP48449 732 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 TP53I3Q53FA7 332 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 LRRC25Q8N386 305 aaPredicted RBP15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 OR4K14Q8NGD5 310 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 FAM3CQ92520 227 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 GABRG3Q99928 467 aa15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.01□□□□□ -0.01
NKX3-1-201ENST00000380871 OR51J1Q9H342 316 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms