RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 RTL4Q6ZR62 310 aa19.83■□□□□ 0.76
TRIM54-202ENST00000380075 SIRT6Q8N6T7 355 aa19.83■□□□□ 0.76
TRIM54-202ENST00000380075 RCBTB1Q8NDN9 531 aa19.83■□□□□ 0.76
TRIM54-202ENST00000380075 OR51G2Q8NGK0 314 aa19.83■□□□□ 0.76
TRIM54-202ENST00000380075 SPRYD4Q8WW59 207 aaPredicted RBP19.83■□□□□ 0.76
TRIM54-202ENST00000380075 EDEM2Q9BV94 578 aa19.83■□□□□ 0.76
TRIM54-202ENST00000380075 TPK1Q9H3S4 243 aa19.83■□□□□ 0.76
TRIM54-202ENST00000380075 PLEKHB1Q9UF11 243 aaPredicted RBP19.83■□□□□ 0.76
TRIM54-202ENST00000380075 V9GYH0 126 aa19.83■□□□□ 0.76
TRIM54-202ENST00000380075 RALGAPA1Q6GYQ0 2036 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 FAM183AA6NL82 134 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 DLGAP3O95886 979 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 PTNP21246 168 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 SLC6A6P31641 620 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 SDC2P34741 201 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 CAPZA2P47755 286 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 RNF144AP50876 292 aaPredicted RBP19.82■□□□□ 0.76
TRIM54-202ENST00000380075 EPHA4P54764 986 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 HNRNPKP61978 463 aaKnown RBP eCLIP19.82■□□□□ 0.76
TRIM54-202ENST00000380075 MXD1Q05195 221 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.82■□□□□ 0.76
TRIM54-202ENST00000380075 OGFOD3Q6PK18 319 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 NPSR1Q6W5P4 371 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 LINC00114Q6XXX2 140 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 ARIH2OSQ8N7S6 290 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 FAM181AQ8N9Y4 354 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 OR4N2Q8NGD1 307 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 OR4C6Q8NH72 309 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 SLC2A12Q8TD20 617 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 OTULINQ96BN8 352 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 MMABQ96EY8 250 aaPredicted RBP19.82■□□□□ 0.76
TRIM54-202ENST00000380075 TM9SF2Q99805 663 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 IRAK4Q9NWZ3 460 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 SOHLH2Q9NX45 425 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 RPS6KB2Q9UBS0 482 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 YARS2Q9Y2Z4 477 aaKnown RBP19.82■□□□□ 0.76
TRIM54-202ENST00000380075 ZNF292O60281 2723 aa19.82■□□□□ 0.76
TRIM54-202ENST00000380075 ZNF3P17036 446 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 HK1P19367 917 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 FUT1P19526 365 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 CD79BP40259 229 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 GPR143P51810 404 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 MAT1AQ00266 395 aaKnown RBP19.81■□□□□ 0.76
TRIM54-202ENST00000380075 GRM7Q14831 915 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 DDI2Q5TDH0 399 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 THSD4Q6ZMP0 1018 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 OAFQ86UD1 273 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 ZNF440Q8IYI8 595 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 OR7G1Q8NGA0 311 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 ZDHHC12Q96GR4 267 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 KATNB1Q9BVA0 655 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 OR10A5Q9H207 317 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 UCKL1Q9NWZ5 548 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 LMO7DNF2Z398 122 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 AQP9O43315 295 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 CDC123O75794 336 aaPredicted RBP19.81■□□□□ 0.76
TRIM54-202ENST00000380075 PIAS2O75928 621 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 LALBAP00709 142 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 IFNGP01579 166 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 CT45A8P0DMV1 189 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 CT45A9P0DMV2 189 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 PEPDP12955 493 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 ZNF791Q3KP31 576 aaPredicted RBP19.81■□□□□ 0.76
TRIM54-202ENST00000380075 CT45A2Q5DJT8 189 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 ARHGAP11AQ6P4F7 1023 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 MED25Q71SY5 747 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 GATAD2AQ86YP4 633 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 LAX1Q8IWV1 398 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 SLC37A3Q8NCC5 494 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 ATP6V1C2Q8NEY4 427 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 OR51Q1Q8NH59 317 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 C16orf52Q8NHV5 167 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 DNAJA4Q8WW22 397 aaPredicted RBP19.81■□□□□ 0.76
TRIM54-202ENST00000380075 HTRA1Q92743 480 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 PTCHD1Q96NR3 888 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 CCNL2Q96S94 520 aaPredicted RBP19.81■□□□□ 0.76
TRIM54-202ENST00000380075 ENKD1Q9H0I2 346 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 HAO2Q9NYQ3 351 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 ERVK-19Q9WJR5 959 aa19.81■□□□□ 0.76
TRIM54-202ENST00000380075 C12orf71A8MTZ7 269 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 CD53P19397 219 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 CELP19835 753 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 CFL1P23528 166 aaKnown RBP19.8■□□□□ 0.76
TRIM54-202ENST00000380075 BTG2P78543 158 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 GALEQ14376 348 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 SLC35F1Q5T1Q4 408 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 CARFQ8N187 725 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 C7orf57Q8NEG2 295 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 KISS1RQ969F8 398 aaPredicted RBP19.8■□□□□ 0.76
TRIM54-202ENST00000380075 KIAA1143Q96AT1 154 aaPredicted RBP19.8■□□□□ 0.76
TRIM54-202ENST00000380075 SYNDIG1Q9H7V2 258 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 MKKSQ9NPJ1 570 aaPredicted RBP19.8■□□□□ 0.76
TRIM54-202ENST00000380075 ENAMQ9NRM1 1142 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 DTX4Q9Y2E6 619 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 OR10H1Q9Y4A9 318 aa19.8■□□□□ 0.76
TRIM54-202ENST00000380075 HTR3EA5X5Y0 456 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 HRKO00198 91 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 RFPL3O75679 317 aa19.79■□□□□ 0.76
TRIM54-202ENST00000380075 EPHA8P29322 1005 aaPredicted RBP19.79■□□□□ 0.76
TRIM54-202ENST00000380075 POU4F2Q12837 409 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms