RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 DEFB124Q8NES8 71 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 HOXB13Q92826 284 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 NACC2Q96BF6 587 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 MOAP1Q96BY2 351 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 SENP5Q96HI0 755 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 SLC35G5Q96KT7 338 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 CLUHP3Q96NS8 147 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 EGLN3Q9H6Z9 239 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 LANCL2Q9NS86 450 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 DLL3Q9NYJ7 618 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 NXT1Q9UKK6 140 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 CMAHPQ9Y471 501 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 MYO15AQ9UKN7 3530 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 TERTO14746 1132 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 PGRMC2O15173 223 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 ATP1B1P05026 303 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 TLX1P31314 330 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 S100A5P33763 92 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 RORCP51449 518 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 WNT4P56705 351 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 TARDBPQ13148 414 aaKnown RBP eCLIP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 DEFB110Q30KQ9 67 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 PHF19Q5T6S3 580 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 ZNF730Q6ZMV8 503 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 DEF8Q6ZN54 512 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 RASSF6Q6ZTQ3 369 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 NR2C2APQ86WQ0 139 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 PLPP5Q8NEB5 264 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 KISS1RQ969F8 398 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 ZNF607Q96SK3 696 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 CCDC86Q9H6F5 360 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 MOV10Q9HCE1 1003 aaKnown RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 ZNF229Q9UJW7 825 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 ZNF223Q9UK11 482 aaPredicted RBP7.11□□□□□ -1.27
CDKL5-202ENST00000379996 ATG4BQ9Y4P1 393 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 CLDN16Q9Y5I7 305 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 N6AMT1Q9Y5N5 214 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 OTOGLQ3ZCN5 2332 aa7.11□□□□□ -1.27
CDKL5-202ENST00000379996 A0A0G2JPF8 293 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 CDRT15L2A8MXV6 281 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 HNRNPCL2B2RXH8 293 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 HNRNPCL3B7ZW38 293 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 PRODHO43272 600 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 SCO2O43819 266 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 SCRG1O75711 98 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 GUSBP08236 651 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 HNRNPCL4P0DMR1 293 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 GABRA5P31644 462 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 ADH7P40394 386 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 ID4P47928 161 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 KHKP50053 298 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 NKX2-5P52952 324 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-202ENST00000379996 TSPAN31Q12999 210 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 KRR1Q13601 381 aaKnown RBP7.1□□□□□ -1.27
CDKL5-202ENST00000379996 ZNF750Q32MQ0 723 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 DEFB134Q4QY38 66 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 SLC35F1Q5T1Q4 408 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 DCAF12Q5T6F0 453 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 FHL5Q5TD97 284 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 LIPKQ5VXJ0 399 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 PWWP2BQ6NUJ5 590 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 PMEPA1Q969W9 287 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 EXOSC8Q96B26 276 aaKnown RBP7.1□□□□□ -1.27
CDKL5-202ENST00000379996 ZG16BQ96DA0 208 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 TMCO6Q96DC7 493 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 LRR1Q96L50 414 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 NRSN2Q9GZP1 204 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 ZNF304Q9HCX3 659 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 B3GAT2Q9NPZ5 323 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 IL20Q9NYY1 176 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 PPIEQ9UNP9 301 aaKnown RBP7.1□□□□□ -1.27
CDKL5-202ENST00000379996 CARD8Q9Y2G2 431 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 A0A1W2PQ09 198 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 POLR1CO15160 346 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-202ENST00000379996 CHST10O43529 356 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 OR10H3O60404 316 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 CTNSO60931 367 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 ZGLP1P0C6A0 271 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 GALP22466 123 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 MAP3K8P41279 467 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 SMIM11AP58511 58 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 RAB8AP61006 207 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 RTP5Q14D33 572 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 SPANXN2Q5MJ10 180 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 C1QTNF12Q5T7M4 302 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 XKRXQ6PP77 449 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 HSDL2Q6YN16 418 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 RAB11FIP2Q7L804 512 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 OVCH1Q7RTY7 1134 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 SNX18Q96RF0 628 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 ATF6BQ99941 703 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 PRSS27Q9BQR3 290 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 NUAK2Q9H093 628 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 SEC14L3Q9UDX4 400 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 ENTPD4Q9Y227 616 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 MRPS33Q9Y291 106 aaKnown RBP7.1□□□□□ -1.27
CDKL5-202ENST00000379996 A0A087WV62 115 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 TRDV1A0A1B0GX56 115 aa7.1□□□□□ -1.27
CDKL5-202ENST00000379996 A0A1W2PNU3 283 aaPredicted RBP7.1□□□□□ -1.27
CDKL5-202ENST00000379996 FAM47E-STBD1D6RA91 191 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms