RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 GJE1A6NN92 205 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 OPN1LWP04000 364 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 GLI4P10075 376 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 SHC1P29353 583 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 TACR3P29371 465 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 POLR2HP52434 150 aaKnown RBP16.86■□□□□ 0.29
SSU72-203ENST00000378725 MAP2K6P52564 334 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 SELENOWP63302 87 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 BNIP1Q12981 228 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 CYBRD1Q53TN4 286 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 RPTNQ6XPR3 784 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 ESPNLQ6ZVH7 1005 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 SEM1Q6ZVN7 128 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 UBQLNLQ8IYU4 475 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 ARHGAP24Q8N264 748 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 SMPDL3BQ92485 455 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 CCDC120Q96HB5 630 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 KLHL15Q96M94 604 aa16.86■□□□□ 0.29
SSU72-203ENST00000378725 TESQ9UGI8 421 aaKnown RBP16.86■□□□□ 0.29
SSU72-203ENST00000378725 ESPL1Q14674 2120 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 KDM4EB2RXH2 506 aaPredicted RBP16.85■□□□□ 0.29
SSU72-203ENST00000378725 SEC14L5O43304 696 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 FMO6PO60774 539 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 LDLRP01130 860 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 HTR2AP28223 471 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 PER3P56645 1201 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 RGS8P57771 180 aaPredicted RBP16.85■□□□□ 0.29
SSU72-203ENST00000378725 ADORA2A-AS1P86434 159 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 PMPCAQ10713 525 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 CEACAM7Q14002 265 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 NPTX1Q15818 432 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 TMEM176BQ3YBM2 270 aaPredicted RBP16.85■□□□□ 0.29
SSU72-203ENST00000378725 LRRC23Q53EV4 343 aaPredicted RBP16.85■□□□□ 0.29
SSU72-203ENST00000378725 GLYATQ6IB77 296 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 C3orf33Q6P1S2 294 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 CBLL1Q75N03 491 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 LACC1Q8IV20 430 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 CADM2Q8N3J6 435 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 FAM156AQ8NDB6 213 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 OR4D11Q8NGI4 311 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 OR6T1Q8NGN1 323 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 OR2V1Q8NHB1 315 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 SLC7A6OSQ96CW6 309 aaPredicted RBP16.85■□□□□ 0.29
SSU72-203ENST00000378725 TRIB1Q96RU8 372 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 ZNF559Q9BR84 538 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 TRIM2Q9C040 744 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 TMEM185BQ9H7F4 350 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 GORASP2Q9H8Y8 452 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 CHRNA9Q9UGM1 479 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 EGFL7Q9UHF1 273 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 GTF3C1Q12789 2109 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 DNAJC13O75165 2243 aa16.85■□□□□ 0.29
SSU72-203ENST00000378725 HEATR5AQ86XA9 2040 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 TMED7-TICAM2A0A0A6YYA0 188 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 CLCA1A8K7I4 914 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 M0R3H8 397 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 EIF1AYO14602 144 aaKnown RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 ZNF208O43345 1280 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 AGFG2O95081 481 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 NCK1P16333 377 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 SFTPDP35247 375 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 TIMP3P35625 211 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 CLK1P49759 484 aaKnown RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 NUP107P57740 925 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 RPS3AP61247 264 aaKnown RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 PDSS1Q5T2R2 415 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 NCCRP1Q6ZVX7 275 aaPredicted RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 CHMP1BQ7LBR1 199 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 RANBP3LQ86VV4 465 aaPredicted RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 OR52E4Q8NGH9 312 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 OR10D3Q8NH80 312 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 SLC25A43Q8WUT9 341 aaPredicted RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 PROX1Q92786 737 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 WNT2BQ93097 391 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 C3orf49Q96BT1 292 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 PRR14Q9BWN1 585 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 PCDHAC1Q9H158 963 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 C12orf10Q9HB07 376 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 ADPRHL2Q9NX46 363 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 PAQR5Q9NXK6 330 aaPredicted RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 CLCF1Q9UBD9 225 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 PRPF19Q9UMS4 504 aaKnown RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 TMED7Q9Y3B3 224 aa16.84■□□□□ 0.29
SSU72-203ENST00000378725 SPIN1Q9Y657 262 aaPredicted RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 UBR5O95071 2799 aaPredicted RBP16.84■□□□□ 0.29
SSU72-203ENST00000378725 RELNP78509 3460 aa16.83■□□□□ 0.29
SSU72-203ENST00000378725 TMEM72A0PK05 275 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 MBD3L4A6NDZ8 208 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 MBD3L3A6NE82 208 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 MBD3L5A6NJ08 208 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 TNFSF11O14788 317 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 TOXO94900 526 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 TCN1P20061 433 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 CEACAM8P31997 349 aaPredicted RBP16.83■□□□□ 0.28
SSU72-203ENST00000378725 CARD18P57730 90 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 CBX1P83916 185 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 OR1Q1Q15612 314 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 RIPPLY2Q5TAB7 128 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 HBMQ6B0K9 141 aa16.83■□□□□ 0.28
SSU72-203ENST00000378725 POMZP3Q6PJE2 187 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms