RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 AGAP14A8MT82 685 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TUSC2O75896 110 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 WBP2NLQ6ICG8 309 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 THAP7Q9BT49 309 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 INPP5EQ9NRR6 644 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 MEIS3P1A6NDR6 274 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 FAM171A2A8MVW0 826 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 DVL1O14640 695 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ARPC1BO15143 372 aaKnown RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 HPGDSO60760 199 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 HLCSP50747 726 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 DVL1P1P54792 670 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 OR52B6Q8NGF0 335 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 INPP5KQ9BT40 448 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 NMNAT2Q9BZQ4 307 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TMEM59LQ9UK28 342 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 NUDT21O43809 227 aaKnown RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 CHRNEQ04844 493 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 MPPED2Q15777 294 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 HRH4Q9H3N8 390 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 AIG1Q9NVV5 245 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 WRAP73Q9P2S5 460 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 GAPDHSO14556 408 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ENSAO43768 121 aaKnown RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ARHGEF15O94989 841 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 HLA-HP01893 362 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 SNRNP70P08621 437 aaKnown RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TM4SF1P30408 202 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 CA5AP35218 305 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF74Q16587 644 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 GAB3Q8WWW8 586 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 MCOLN1Q9GZU1 580 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TXNL4BQ9NX01 149 aaKnown RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 BOKQ9UMX3 212 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 SCML1Q9UN30 329 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 PIAS3Q9Y6X2 628 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 RPL11P62913 178 aaKnown RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 GAB1Q13480 694 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 LCN8Q6JVE9 175 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 OGFOD3Q6PK18 319 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ZGRF1Q86YA3 2104 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 PRDM9Q9NQV7 894 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 LRP5LA4QPB2 252 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 XCR1P46094 333 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 DBPQ10586 325 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TECPR1Q7Z6L1 1165 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 CDRT4Q8N9R6 151 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 IL17FQ96PD4 163 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TSSK2Q96PF2 358 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 OCSTAMPQ9BR26 566 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 A0A0J9YY10 115 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 MSTNO14793 375 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ONECUT3O60422 494 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TACR3P29371 465 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 OR4N2Q8NGD1 307 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 OR9Q2Q8NGE9 314 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 OR11L1Q8NGX0 322 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 MUL1Q969V5 352 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ELP4Q96EB1 424 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF486Q96H40 463 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ZBED3Q96IU2 234 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 UHRF2Q96PU4 802 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 DUSP23Q9BVJ7 150 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TMEM184BQ9Y519 407 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 S1PR4O95977 384 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 DBHP09172 617 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF44P15621 663 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 PLA2G7Q13093 441 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 SLC14A1Q13336 389 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 NR0B2Q15466 257 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 NADSYN1Q6IA69 706 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF322Q6U7Q0 402 aaPredicted RBP11.72□□□□□ -0.53
VPS13A-204ENST00000376634 FAM109AQ8N4B1 249 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 DOK4Q8TEW6 326 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ALOXE3Q9BYJ1 711 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 TAS2R16Q9NYV7 291 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 ADAMTS6Q9UKP5 1117 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 MED16Q9Y2X0 877 aa11.72□□□□□ -0.53
VPS13A-204ENST00000376634 SGK494L7N484 410 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 EIF3FO00303 357 aaPredicted RBP11.71□□□□□ -0.53
VPS13A-204ENST00000376634 RPL13AP40429 203 aaKnown RBP11.71□□□□□ -0.53
VPS13A-204ENST00000376634 P2RY14Q15391 338 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 UNC50Q53HI1 259 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 LRRC28Q86X40 367 aaPredicted RBP11.71□□□□□ -0.53
VPS13A-204ENST00000376634 OR1E3Q8WZA6 343 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 HHIPL1Q96JK4 782 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 CENPOQ9BU64 300 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 RPS10-NUDT3A0A1W2PQS6 291 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 RPS10P46783 165 aaKnown RBP11.71□□□□□ -0.53
VPS13A-204ENST00000376634 CLDN6P56747 220 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 ZNF33BQ06732 778 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 ACTBL2Q562R1 376 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 LRRC18Q8N456 261 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 PRRC1Q96M27 445 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 SMIM3Q9BZL3 60 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 NCOR1O75376 2440 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 SDHDO14521 159 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 MT-ND4P03905 459 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 HLA-DOBP13765 273 aa11.71□□□□□ -0.53
VPS13A-204ENST00000376634 OR8B8Q15620 311 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms