RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ZC3HAV1LQ96H79 300 aaKnown RBP11.28□□□□□ -0.6
UBR4-203ENST00000375225 AHCYL2Q96HN2 611 aaKnown RBP11.28□□□□□ -0.6
UBR4-203ENST00000375225 TEAD3Q99594 435 aa11.28□□□□□ -0.6
UBR4-203ENST00000375225 SLC19A3Q9BZV2 496 aa11.28□□□□□ -0.6
UBR4-203ENST00000375225 OR51V1Q9H2C8 321 aa11.28□□□□□ -0.6
UBR4-203ENST00000375225 ATP13A2Q9NQ11 1180 aa11.28□□□□□ -0.6
UBR4-203ENST00000375225 PRMT8Q9NR22 394 aaPredicted RBP11.28□□□□□ -0.6
UBR4-203ENST00000375225 INIPQ9NRY2 104 aa11.28□□□□□ -0.6
UBR4-203ENST00000375225 MRTO4Q9UKD2 239 aaKnown RBP11.28□□□□□ -0.6
UBR4-203ENST00000375225 OR10H1Q9Y4A9 318 aa11.28□□□□□ -0.6
UBR4-203ENST00000375225 NPIPA5A0A0B4J1W7 369 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 MEIOCA2RUB1 952 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 LILRA5A6NI73 299 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 CD8B2A6NJW9 211 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 FAM183AA6NL82 134 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 NPIPA7E9PJI5 369 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 TMEM127O75204 238 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 PTP4A3O75365 173 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 PDGFBP01127 241 aaPredicted RBP11.27□□□□□ -0.61
UBR4-203ENST00000375225 IGF2P01344 180 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 CSF2P04141 144 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 WNT1P04628 370 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SBK2P0C263 348 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 NPIPA8P0DM63 369 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 CD8BP10966 210 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 MAOBP27338 520 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SOX18P35713 384 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 RFX3P48380 749 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 HSD17B7P56937 341 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 HSF2Q03933 536 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 ZFP69Q49AA0 526 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 ZNF542PQ5EBM4 170 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SLC35D3Q5M8T2 416 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 BAIAP2L2Q6UXY1 529 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 WDR88Q6ZMY6 472 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SLITRK4Q8IW52 837 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 TEX19Q8NA77 164 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 TMEM52Q8NDY8 209 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 OR7G1Q8NGA0 311 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 OR9A4Q8NGU2 314 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 PATE1Q8WXA2 126 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 DNASE2BQ8WZ79 361 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SMPDL3BQ92485 455 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 PHYHIPQ92561 330 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SNX18Q96RF0 628 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 UBL7Q96S82 380 aaPredicted RBP11.27□□□□□ -0.61
UBR4-203ENST00000375225 CTRCQ99895 268 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 ZNF649Q9BS31 505 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 TTYH2Q9BSA4 534 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 ZNF426Q9BUY5 554 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 TCEAL2Q9H3H9 227 aaPredicted RBP11.27□□□□□ -0.61
UBR4-203ENST00000375225 RNF121Q9H920 327 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 CAPN10Q9HC96 672 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 NEK6Q9HC98 313 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 C20orf141Q9NUB4 165 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 DDX28Q9NUL7 540 aaKnown RBP11.27□□□□□ -0.61
UBR4-203ENST00000375225 DNAJB12Q9NXW2 375 aaKnown RBP11.27□□□□□ -0.61
UBR4-203ENST00000375225 IL20RAQ9UHF4 553 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SERTAD3Q9UJW9 196 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 PLCL2Q9UPR0 1127 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SLC6A5Q9Y345 797 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 SLCO1B1Q9Y6L6 691 aa11.27□□□□□ -0.61
UBR4-203ENST00000375225 GOLGA4Q13439 2230 aaKnown RBP11.27□□□□□ -0.61
UBR4-203ENST00000375225 THADAQ6YHU6 1953 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 CENPVL1A0A0U1RR11 272 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 CENPXA8MT69 81 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 B4DGG1 531 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 BCAT2O15382 392 aaPredicted RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 HPGDSO60760 199 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 DNAJB6O75190 326 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 ARL6IP5O75915 188 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 PPP1R3DO95685 299 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 CD1AP06126 327 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 OR2T7P0C7T2 308 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 PNMTP11086 282 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 NME1P15531 152 aaKnown RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 ST6GAL1P15907 406 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 TYRP1P17643 537 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 RBMS1P29558 406 aaKnown RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 RFX2P48378 723 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 FNTBP49356 437 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 AFF3P51826 1226 aaKnown RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 NRG3P56975 720 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 RAB25P57735 213 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 NXPH1P58417 271 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 PRPS1P60891 318 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 PSG6Q00889 435 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 CRYZQ08257 329 aaKnown RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 CD300CQ08708 224 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 DMWDQ09019 674 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.26□□□□□ -0.61
UBR4-203ENST00000375225 ISXQ2M1V0 245 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 CCDC92Q53HC0 331 aaPredicted RBP11.26□□□□□ -0.61
UBR4-203ENST00000375225 ZMAT1Q5H9K5 638 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 BICRALQ6AI39 1079 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 DPY19L2P2Q6ZN68 376 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 SYS1Q8N2H4 156 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 SDR16C5Q8N3Y7 309 aa11.26□□□□□ -0.61
UBR4-203ENST00000375225 FAM98AQ8NCA5 519 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms