RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 VWC2Q2TAL6 325 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 PPM1LQ5SGD2 360 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ABHD13Q7L211 337 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CPEB2Q7Z5Q1 589 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 NAXDQ8IW45 347 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 NUBPLQ8TB37 319 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 PIGTQ969N2 578 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ABHD6Q9BV23 337 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 NAA50Q9GZZ1 169 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 LMAN1LQ9HAT1 526 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 PDE10AQ9Y233 779 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 A0A1W2PQ45 241 aaPredicted RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 A0A1W2PQY0 241 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 PDXKO00764 312 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 TCF21O43680 179 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CEACAM4O75871 244 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 MT-CYBP00156 380 aaPredicted RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 ZNF286BP0CG31 522 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CPN1P15169 458 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 QARSP47897 775 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 SIX1Q15475 284 aaPredicted RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 ASB18Q6ZVZ8 466 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 OR13D1Q8NGV5 346 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 MAPK15Q8TD08 544 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 SLC25A28Q96A46 364 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ESRP2Q9H6T0 727 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 RGS18Q9NS28 235 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 BAIAP2Q9UQB8 552 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CSDC2Q9Y534 153 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 DOCK6Q96HP0 2047 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 C2orf71A6NGG8 1288 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 SLC38A8A6NNN8 435 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 RAMP3O60896 148 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 TJP3O95049 919 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ST6GAL1P15907 406 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 GABRA5P31644 462 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CEACAM8P31997 349 aaPredicted RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 CPOXP36551 454 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 P2RY2P41231 377 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 AKR1C3P42330 323 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 MARCKSL1P49006 195 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 RBP2P50120 134 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ATP1B3P54709 279 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ID3Q02535 119 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 KPNB1Q14974 876 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 DCAF12L2Q5VW00 463 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 EEF1DP3Q658K8 133 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 FAM109BQ6ICB4 259 aaPredicted RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 BTNL3Q6UXE8 466 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 RBMS3Q6XE24 437 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 RNASEH2CQ8TDP1 164 aaKnown RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 SMPDL3BQ92485 455 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ADAMTS10Q9H324 1103 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 NECAP2Q9NVZ3 263 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ZNF224Q9NZL3 707 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 PRSS50Q9UI38 385 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 MICAL3Q7RTP6 2002 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CXCL10P02778 98 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 HOXC6P09630 235 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 JUNBP17275 347 aaPredicted RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 RHOAP61586 193 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ZNF616Q08AN1 781 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ABLIM2Q6H8Q1 611 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 FRMPD2BQ6IN97 320 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CALHM1Q8IU99 346 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 CRIPAKQ8N1N5 446 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 PRSS35Q8N3Z0 413 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 DNERQ8NFT8 737 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 OR52H1Q8NGJ2 320 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 STACQ99469 402 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ILKAPQ9H0C8 392 aaPredicted RBP8.32□□□□□ -1.08
UBR4-201ENST00000375218 GPATCH2Q9NW75 528 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 ERVK13-1Q9NX77 482 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 GLTPQ9NZD2 209 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 OR12D3Q9UGF7 316 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 METRNQ9UJH8 293 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 PIGLQ9Y2B2 252 aa8.32□□□□□ -1.08
UBR4-201ENST00000375218 C1orf226A1L170 272 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 H7C2Y5 167 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 SHOX2O60902 331 aaPredicted RBP8.31□□□□□ -1.08
UBR4-201ENST00000375218 LRP3O75074 770 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 GLP2RO95838 553 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 SERPINA5P05154 406 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 OR8U9P0C7N5 309 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 TWF1Q12792 350 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 KRT81Q14533 505 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 ZNF699Q32M78 642 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 FAM199XQ6PEV8 388 aaPredicted RBP8.31□□□□□ -1.08
UBR4-201ENST00000375218 BEND7Q8N7W2 519 aaPredicted RBP8.31□□□□□ -1.08
UBR4-201ENST00000375218 FAM71CQ8NEG0 241 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 OR8J3Q8NGG0 315 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 CCDC107Q8WV48 283 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 AIF1LQ9BQI0 150 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 SEMA6CQ9H3T2 930 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 TCRBV7S2A1N4TA0A589 114 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 TEX22C9J3V5 150 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 GPR25O00155 361 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 SBK3P0C264 359 aa8.31□□□□□ -1.08
UBR4-201ENST00000375218 CPSF6Q16630 551 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms