RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 GIN1Q9NXP7 522 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 P2RX2Q9UBL9 471 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 AASSQ9UDR5 926 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 OSGIN1Q9UJX0 560 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TMCC3Q9ULS5 477 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 CA14Q9ULX7 337 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 DUSP12Q9UNI6 340 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 MGAT4BQ9UQ53 548 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 WDR37Q9Y2I8 494 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SH3GLB1Q9Y371 365 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 SNX8Q9Y5X2 465 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 HS3ST3B1Q9Y662 390 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 COL6A3P12111 3177 aa4.43□□□□□ -1.7
USP48-202ENST00000374730 TRBV4-1A0A0J9YWV2 114 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 FEZF1A0PJY2 475 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ANTXRLA6NF34 631 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 PGPEP1LA6NFU8 196 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 METTL15A6NJ78 407 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 EFCAB9A8MZ26 197 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ANHXE9PGG2 379 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 KPNA4O00629 521 aaPredicted RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 FFAR1O14842 300 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 CASC3O15234 703 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 MAGEB3O15480 346 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ASNA1O43681 348 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 OR1F1O43749 312 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SLC28A2O43868 658 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 AIREO43918 545 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 LCMT2O60294 686 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 NADKO95544 446 aaPredicted RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 H1F0P07305 194 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 CD63P08962 238 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ADORA3P0DMS8 318 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ACP5P13686 325 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 HIST1H1TP22492 207 aaPredicted RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 CHMP24386 653 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 CMPK1P30085 196 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 PEBP1P30086 187 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 NTSP30990 170 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SLC15A1P46059 708 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 IDH2P48735 452 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 CCT3P49368 545 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 CRISP3P54108 245 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ADPRHP54922 357 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 CASP9P55211 416 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 LIM2P55344 173 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 KIAA1024LP59773 190 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 VBP1P61758 197 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 NCS1P62166 190 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.42□□□□□ -1.7
USP48-202ENST00000374730 HSPB3Q12988 150 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ILKQ13418 452 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 FHL3Q13643 280 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 DGCR6Q14129 220 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 GNA13Q14344 377 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 GANABQ14697 944 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 PTGES3Q15185 160 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 CEBPEQ15744 281 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 TIGD6Q17RP2 521 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 LEXMQ3ZCV2 418 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 DCST1Q5T197 706 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 MEDAGQ5VYS4 303 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 RNLSQ5VYX0 342 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 C12orf73Q69YU5 71 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 FRMPD2BQ6IN97 320 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 NIPAL1Q6NVV3 410 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 TNFAIP8L2Q6P589 184 aaPredicted RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 BHLHB9Q6PI77 547 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 C19orf48Q6RUI8 117 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 KLHL17Q6TDP4 642 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 WASH2PQ6VEQ5 465 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ZNF793Q6ZN11 406 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 USP43Q70EL4 1123 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 KRT74Q7RTS7 529 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ZNF554Q86TJ5 538 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ADCK1Q86TW2 530 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 PLD3Q8IV08 490 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 CENPSQ8N2Z9 138 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 STX19Q8N4C7 294 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 TMCO5AQ8N6Q1 288 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 MFSD9Q8NBP5 474 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 SRFBP1Q8NEF9 429 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 KBTBD8Q8NFY9 601 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 OR2L5Q8NG80 312 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 OR2L3Q8NG85 312 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 OR52E1Q8NGJ3 308 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 OR52J3Q8NH60 311 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ZNF675Q8TD23 568 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 UTP15Q8TED0 518 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 WIPF2Q8TF74 440 aaPredicted RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 NR4A3Q92570 626 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 EXOSC8Q96B26 276 aaKnown RBP4.42□□□□□ -1.7
USP48-202ENST00000374730 MS4A6EQ96DS6 147 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 LGALS12Q96DT0 336 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 ZHX1-C8orf76Q96EF9 292 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 Q96MT0 163 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 AMDHD1Q96NU7 426 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 NRTNQ99748 197 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 GABRG3Q99928 467 aa4.42□□□□□ -1.7
USP48-202ENST00000374730 MROQ9BYG7 248 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms