RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 PCDHAC1Q9H158 963 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 TP63Q9H3D4 680 aaPredicted RBP10.25□□□□□ -0.77
HSPG2-202ENST00000374676 C12orf10Q9HB07 376 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 TMEM27Q9HBJ8 222 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 SERINC1Q9NRX5 453 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 PNPLA3Q9NST1 481 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 ACTR3BQ9P1U1 418 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 TNFRSF10DQ9UBN6 386 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 TESQ9UGI8 421 aaKnown RBP10.25□□□□□ -0.77
HSPG2-202ENST00000374676 OSGIN1Q9UJX0 560 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 SNX13Q9Y5W8 968 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 DOCK7Q96N67 2140 aa10.25□□□□□ -0.77
HSPG2-202ENST00000374676 DOPEY1Q5JWR5 2465 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 INTS1Q8N201 2190 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 FIGNL2A6NMB9 653 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 H3BML4 177 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 M0R3H8 397 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 ARPC2O15144 300 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 ADAMDEC1O15204 470 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 SERPINA1P01009 418 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 IL11P20809 199 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 HTR2AP28223 471 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 TACR3P29371 465 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CA7P43166 264 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CLK1P49759 484 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CLDN15P56746 228 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 KCNC4Q03721 635 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 TRAP1Q12931 704 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 NPTX1Q15818 432 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 MTX3Q5HYI7 312 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 ULK3Q6PHR2 472 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CCDC121Q6ZUS5 278 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 GGNQ86UU5 652 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CARM1Q86X55 608 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 LACC1Q8IV20 430 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 ULK2Q8IYT8 1036 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 LILRA2Q8N149 483 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CADM2Q8N3J6 435 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 MEIOBQ8N635 442 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 OR4D11Q8NGI4 311 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 OR5M9Q8NGP3 310 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 PRR7Q8TB68 274 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 SLC25A43Q8WUT9 341 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 DNAJA4Q8WW22 397 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 POP5Q969H6 163 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 C3orf49Q96BT1 292 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 ADGRG7Q96K78 797 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 NSMCE2Q96MF7 247 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 MCHR1Q99705 422 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CADM1Q9BY67 442 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 POLR2J2Q9GZM3 115 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 POLR2J3Q9H1A7 115 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 LRMDAQ9H2I8 198 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CTPS2Q9NRF8 586 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 SAMD4AQ9UPU9 718 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 CAMK2AQ9UQM7 478 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 SH3GLB1Q9Y371 365 aa10.24□□□□□ -0.77
HSPG2-202ENST00000374676 SPIN1Q9Y657 262 aaPredicted RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 SPTAN1Q13813 2472 aaKnown RBP10.24□□□□□ -0.77
HSPG2-202ENST00000374676 TMED7-TICAM2A0A0A6YYA0 188 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 A0A0B4J2E0 115 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 TRGV8A0A0C4DH27 118 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 A0A1B0GUH1 482 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 A0A1B0GWA3 101 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 A0A1B0GX12 115 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 GJE1A6NN92 205 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ZNF208O43345 1280 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 PDE5AO76074 875 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ZNF682O95780 498 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 CXCR1P25024 350 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ACVR2AP27037 513 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 SUCLG1P53597 346 aaKnown RBP10.23□□□□□ -0.77
HSPG2-202ENST00000374676 CLDN20P56880 219 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 RPS3AP61247 264 aaKnown RBP10.23□□□□□ -0.77
HSPG2-202ENST00000374676 NCALDP61601 193 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 MS4A2Q01362 244 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 OR1Q1Q15612 314 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 TMEM176BQ3YBM2 270 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-202ENST00000374676 C4orf17Q53FE4 359 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 IFI44LQ53G44 452 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 PDSS1Q5T2R2 415 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 SWT1Q5T5J6 900 aaKnown RBP10.23□□□□□ -0.77
HSPG2-202ENST00000374676 LCN8Q6JVE9 175 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 C3orf33Q6P1S2 294 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ZNF585AQ6P3V2 769 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ZNF613Q6PF04 617 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ESPNLQ6ZVH7 1005 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 VTCN1Q7Z7D3 282 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ADGRE4PQ86SQ3 457 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ATG4DQ86TL0 474 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-202ENST00000374676 RBM45Q8IUH3 476 aaKnown RBP10.23□□□□□ -0.77
HSPG2-202ENST00000374676 PHF10Q8WUB8 498 aaKnown RBP10.23□□□□□ -0.77
HSPG2-202ENST00000374676 GEMIN6Q8WXD5 167 aaKnown RBP10.23□□□□□ -0.77
HSPG2-202ENST00000374676 ASB9Q96DX5 294 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 TPD52L3Q96J77 140 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 HSH2DQ96JZ2 352 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 CLPTM1LQ96KA5 538 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 KLHL15Q96M94 604 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 UCN2Q96RP3 112 aa10.23□□□□□ -0.77
HSPG2-202ENST00000374676 PRR14Q9BWN1 585 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms