RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 OIP5O43482 229 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 EIF4E2O60573 245 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 KRT75O95678 551 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 GUSBP08236 651 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 IL11P20809 199 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 IDH3AP50213 366 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 CCR4P51679 360 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 FOXF1Q12946 379 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 NDUFAF6Q330K2 333 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 GPAT3Q53EU6 434 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 CBLN3Q6UW01 205 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 BEND4Q6ZU67 534 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 OLIG3Q7RTU3 272 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 OR9I1Q8NGQ6 314 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 RFWD2Q8NHY2 731 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 GMPPAQ96IJ6 420 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 ITCHQ96J02 903 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 EBF4Q9BQW3 602 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 ACTR6Q9GZN1 396 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 OR10A4Q9H209 315 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 SONP18583 2426 aaKnown RBP17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 CUBNO60494 3623 aa17.1■□□□□ 0.33
TRAPPC3-204ENST00000373166 HMGN4O00479 90 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 UGT2B17O75795 530 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 CSTAP01040 98 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 LINGO3P0C6S8 592 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 ELK4P28324 431 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 FUT5Q11128 374 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 CBFBQ13951 182 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 C6orf10Q5SRN2 563 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 TYW3Q6IPR3 259 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 GGNQ86UU5 652 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 STK32CQ86UX6 486 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 ZNF619Q8N2I2 560 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 PNPT1Q8TCS8 783 aaKnown RBP17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 KLHDC3Q9BQ90 382 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 YAE1D1Q9NRH1 226 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 PAQR5Q9NXK6 330 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 CLEC4AQ9UMR7 237 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 LIPT1Q9Y234 373 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 GPR52Q9Y2T5 361 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 GPC6Q9Y625 555 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 PCNX3Q9H6A9 2034 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 USF3Q68DE3 2245 aa17.09■□□□□ 0.33
TRAPPC3-204ENST00000373166 ROS1P08922 2347 aa17.08■□□□□ 0.33
TRAPPC3-204ENST00000373166 CHD3Q12873 2000 aaKnown RBP17.08■□□□□ 0.33
TRAPPC3-204ENST00000373166 OVOL3O00110 214 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 CD5LO43866 347 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 SS18L1O75177 396 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 CYP7B1O75881 506 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 PSMA4P25789 261 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 MAGEA8P43361 318 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 EIF1AXP47813 144 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 SLC6A8P48029 635 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 MRPL19P49406 292 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 RAC1P63000 192 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 PDSS1Q5T2R2 415 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 ADAM5Q6NVV9 412 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 FRRS1Q6ZNA5 592 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 EIF3MQ7L2H7 374 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 OR5W2Q8NH69 310 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 POC1BQ8TC44 478 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 GTPBP3Q969Y2 492 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 VPS33AQ96AX1 596 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 NPAS1Q99742 590 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 TACO1Q9BSH4 297 aaKnown RBP17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 TMEM185BQ9H7F4 350 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 KCNE5Q9UJ90 142 aa17.08■□□□□ 0.32
TRAPPC3-204ENST00000373166 CENPVL1A0A0U1RR11 272 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 H6PDO95479 791 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 C1QCP02747 245 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 UBTFL6P0CB48 400 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 ZCCHC18P0CG32 403 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 ADH6P28332 368 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 IRX1P78414 480 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 SKP2Q13309 424 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 ALKBH2Q6NS38 261 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 ESPNLQ6ZVH7 1005 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 FBXO27Q8NI29 283 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 GPR119Q8TDV5 335 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 ZFP90Q8TF47 636 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 FBXW5Q969U6 566 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 TRNT1Q96Q11 434 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 LAT2Q9GZY6 243 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 SAP130Q9H0E3 1048 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 GLRX2Q9NS18 164 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 MCTS1Q9ULC4 181 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 SLC35A3Q9Y2D2 325 aa17.07■□□□□ 0.32
TRAPPC3-204ENST00000373166 GJE1A6NN92 205 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 NR5A2O00482 541 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 SYNGR4O95473 234 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 NR2F1P10589 423 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 PRKCAP17252 672 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 PSMB1P20618 241 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 QPRTQ15274 297 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 SYPL1Q16563 259 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 CTU2Q2VPK5 515 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 CHRFAM7AQ494W8 412 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 COX20Q5RI15 118 aa17.06■□□□□ 0.32
TRAPPC3-204ENST00000373166 LILRA2Q8N149 483 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms