RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 RAC3P60763 192 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 ADRM1Q16186 407 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 ZNF239Q16600 458 aaKnown RBP17.9■□□□□ 0.46
TMEM53-205ENST00000372244 ZSWIM7Q19AV6 140 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 RUNDC3AQ59EK9 446 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 GTF2IRD2BQ6EKJ0 949 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 C3orf33Q6P1S2 294 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 GRINAQ7Z429 371 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 GTF2IRD2Q86UP8 949 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 ZNF563Q8TA94 476 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 FAM222BQ8WU58 562 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 LURAP1Q96LR2 239 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 ZNF559Q9BR84 538 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 CTPS2Q9NRF8 586 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 ZNF232Q9UNY5 417 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 ABCA4P78363 2273 aa17.9■□□□□ 0.46
TMEM53-205ENST00000372244 CFAP73A6NFT4 308 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 PGM3O95394 542 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 PABPC4LP0CB38 370 aaKnown RBP17.89■□□□□ 0.45
TMEM53-205ENST00000372244 MDH1P40925 334 aaKnown RBP17.89■□□□□ 0.45
TMEM53-205ENST00000372244 ACAA2P42765 397 aaKnown RBP17.89■□□□□ 0.45
TMEM53-205ENST00000372244 ARFIP2P53365 341 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 EPS8Q12929 822 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 LIN52Q52LA3 116 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 RPS26P11Q5JNZ5 115 aaPredicted RBP17.89■□□□□ 0.45
TMEM53-205ENST00000372244 RNF220Q5VTB9 566 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 ZNF440Q8IYI8 595 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 CLIP4Q8N3C7 705 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 RNF128Q8TEB7 428 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 ROBO4Q8WZ75 1007 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 ZNF317Q96PQ6 595 aaPredicted RBP17.89■□□□□ 0.45
TMEM53-205ENST00000372244 RSPO3Q9BXY4 272 aaPredicted RBP17.89■□□□□ 0.45
TMEM53-205ENST00000372244 ADAM19Q9H013 955 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 IFT52Q9Y366 437 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 MYO9AB2RTY4 2548 aa17.89■□□□□ 0.45
TMEM53-205ENST00000372244 A0A1W2PNR3 127 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 TUBAL3A6NHL2 446 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 AP3D1O14617 1153 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 SMNDC1O75940 238 aaKnown RBP eCLIP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ARAFP10398 606 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ETS2P15036 469 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 SLC7A1P30825 629 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 SLC1A3P43003 542 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 HTR3AP46098 478 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 SIRPAP78324 504 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 MYBPHQ13203 477 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 LARS2Q15031 903 aaKnown RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 DAZAP2Q15038 168 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ZNF836Q6ZNA1 936 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 TMPPEQ6ZT21 453 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ZNF610Q8N9Z0 462 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 SLC25A43Q8WUT9 341 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 OPN3Q9H1Y3 402 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 TMEM38AQ9H6F2 299 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 GP6Q9HCN6 339 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 MRGBPQ9NV56 204 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 CHRNA9Q9UGM1 479 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 CORO2BQ9UQ03 480 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ZNF443Q9Y2A4 671 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 CCDC168Q8NDH2 2452 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 EVPLLA8MZ36 301 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 CTAG2O75638 210 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 EPXP11678 715 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ENPP1P22413 925 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 CPA2P48052 419 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 CLK1P49759 484 aaKnown RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 FAM27E3Q08E93 113 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 RNPS1Q15287 305 aaKnown RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 SYT14P1Q58G82 188 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 GCNT6Q5T4J0 391 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 REEP3Q6NUK4 255 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 PPP4R4Q6NUP7 873 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ZZZ3Q8IYH5 903 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 OR6K3Q8NGY3 331 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 BBS10Q8TAM1 723 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 LINC01560Q8TB33 94 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 REXO5Q96IC2 774 aaKnown RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ANKRD27Q96NW4 1050 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 CPPED1Q9BRF8 314 aaPredicted RBP17.88■□□□□ 0.45
TMEM53-205ENST00000372244 SPATA9Q9BWV2 254 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 SAR1AQ9NR31 198 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ELOVL5Q9NYP7 299 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 CLEC4AQ9UMR7 237 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 EMC9Q9Y3B6 208 aa17.88■□□□□ 0.45
TMEM53-205ENST00000372244 ANGPT2O15123 496 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 PLGP00747 810 aaPredicted RBP17.87■□□□□ 0.45
TMEM53-205ENST00000372244 GKN3PP0CG01 181 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 MAP2K6P52564 334 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 CDK6Q00534 326 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 FCRLAQ7L513 359 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 SLC43A2Q8N370 569 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 ABHD3Q8WU67 409 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 OR5B2Q96R09 309 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 CGREF1Q99674 301 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 SLC39A3Q9BRY0 314 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 KLHL14Q9P2G3 628 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.87■□□□□ 0.45
TMEM53-205ENST00000372244 OSGIN1Q9UJX0 560 aa17.87■□□□□ 0.45
TMEM53-205ENST00000372244 ING1Q9UK53 422 aaPredicted RBP17.87■□□□□ 0.45
TMEM53-205ENST00000372244 PROCRQ9UNN8 238 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms