RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 HS6ST2Q96MM7 605 aa14.36□□□□□ -0.11
TMEM53-204ENST00000372243 CNTNAP3BQ96NU0 1288 aa14.36□□□□□ -0.11
TMEM53-204ENST00000372243 FUZQ9BT04 418 aa14.36□□□□□ -0.11
TMEM53-204ENST00000372243 ZNF426Q9BUY5 554 aa14.36□□□□□ -0.11
TMEM53-204ENST00000372243 CNTNAP3Q9BZ76 1288 aa14.36□□□□□ -0.11
TMEM53-204ENST00000372243 OSGIN1Q9UJX0 560 aa14.36□□□□□ -0.11
TMEM53-204ENST00000372243 SAMHD1Q9Y3Z3 626 aaKnown RBP14.36□□□□□ -0.11
TMEM53-204ENST00000372243 ACACBO00763 2458 aa14.36□□□□□ -0.11
TMEM53-204ENST00000372243 RASAL1O95294 804 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 HK1P19367 917 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 FPR1P21462 350 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 RBM34P42696 430 aaKnown RBP14.35□□□□□ -0.11
TMEM53-204ENST00000372243 ARHGDIAP52565 204 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 PPIAP62937 165 aaKnown RBP14.35□□□□□ -0.11
TMEM53-204ENST00000372243 SLC34A1Q06495 639 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 DCST1Q5T197 706 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 SLC6A19Q695T7 634 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 NKAIN4Q8IVV8 208 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 FAM109AQ8N4B1 249 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 LINC00471Q8N535 108 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 TMEM251Q8N6I4 163 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 POC1BQ8TC44 478 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 ACOT11Q8WXI4 607 aaPredicted RBP14.35□□□□□ -0.11
TMEM53-204ENST00000372243 ALPK1Q96QP1 1244 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 SEMA6AQ9H2E6 1030 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 VNN3Q9NY84 501 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 LHX6Q9UPM6 363 aa14.35□□□□□ -0.11
TMEM53-204ENST00000372243 ELOA3DA6NLF2 546 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ERVH48-1M5A8F1 160 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 E2F6O75461 281 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 FUT4P22083 530 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 CXCR1P25024 350 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 FKBP2P26885 142 aaKnown RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ELK4P28324 431 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 MERTKQ12866 999 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 FOXF1Q12946 379 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ELOA3BQ3SY89 546 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 FGD3Q5JSP0 725 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 SHQ1Q6PI26 577 aaKnown RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 C19orf48Q6RUI8 117 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ADGRG3Q86Y34 549 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 RNF113BQ8IZP6 322 aaKnown RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 SVOPLQ8N434 492 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 FAM83FQ8NEG4 500 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ELOA3Q8NG57 546 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 OR52J3Q8NH60 311 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 OR5K1Q8NHB7 308 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 PIGQQ9BRB3 760 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 SLC19A3Q9BZV2 496 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ZDHHC11Q9H8X9 412 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ACKR4Q9NPB9 350 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ZNF71Q9NQZ8 489 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 NKX1-2Q9UD57 310 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 TMCC3Q9ULS5 477 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 U3KQV3 271 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 DSPP15924 2871 aaKnown RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 ATMQ13315 3056 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 NCKAP5O14513 1909 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 TMED7-TICAM2A0A0A6YYA0 188 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 TRBV4-1A0A0J9YWV2 114 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 LINC01387J3KSC0 135 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 CASQ2O14958 399 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 RFC3P40938 356 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 MAGEA5P43359 124 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 TOMM20Q15388 145 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 EXOC3L2Q2M3D2 409 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 PLEKHN1Q494U1 663 aaPredicted RBP14.34□□□□□ -0.11
TMEM53-204ENST00000372243 WDR88Q6ZMY6 472 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 HIPK1Q86Z02 1210 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 EXD3Q8N9H8 876 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 OR14L1PQ8NHC6 308 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 TMEM239Q8WW34 195 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 SLC39A7Q92504 469 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 WBP1Q96G27 269 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 NPAS1Q99742 590 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 PSD2Q9BQI7 771 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 TMEM43Q9BTV4 400 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 MFRPQ9BY79 579 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 SERINC1Q9NRX5 453 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 TMED7Q9Y3B3 224 aa14.34□□□□□ -0.11
TMEM53-204ENST00000372243 A0A087WUU8 490 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 SH3PXD2BA1X283 911 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 HTR3EA5X5Y0 456 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 ARRDC5A6NEK1 342 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 FAM166BA8MTA8 275 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 G3V2T6 193 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 ZNF208O43345 1280 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 TRAPPC6AO75865 159 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 IGF2P01344 180 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 ZNF23P17027 643 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 ZNF24P17028 368 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 IST1P53990 364 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 B3GALT5-AS1P59052 145 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 PPP1R8Q12972 351 aaKnown RBP14.33□□□□□ -0.12
TMEM53-204ENST00000372243 SELENBP1Q13228 472 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 MICAQ29983 383 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.33□□□□□ -0.12
TMEM53-204ENST00000372243 RNFT1Q5M7Z0 435 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 RAET1LQ5VY80 246 aa14.33□□□□□ -0.12
TMEM53-204ENST00000372243 PODNL1Q6PEZ8 512 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms