RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 OR51A7Q8NH64 312 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 TRMT10AQ8TBZ6 339 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 C10orf90Q96M02 699 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 URM1Q9BTM9 101 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 MMP28Q9H239 520 aa12.49□□□□□ -0.41
RAPGEF1-201ENST00000372189 LAMP1P11279 417 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 ETFAP13804 333 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 ADRA1AP35348 466 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 LETMD1Q6P1Q0 360 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR5K2Q8NHB8 316 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 GSTO2Q9H4Y5 243 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 LAMB1P07942 1786 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 A0A087WZY1 265 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 GXYLT2A0PJZ3 443 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 GOSR2O14653 212 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 PHYHO14832 338 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 SC5DO75845 299 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 ERCC1P07992 297 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 PVRP15151 417 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 CPN1P15169 458 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 HMGA1P17096 107 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 WNT4P56705 351 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 ACTBP60709 375 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 RACK1P63244 317 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 ACTG1P63261 375 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 FGFBP1Q14512 234 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 CTSL3PQ5NE16 218 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 METTL11BQ5VVY1 283 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 TRNP1Q6NT89 227 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 FAM217AQ8IXS0 508 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 PNPLA1Q8N8W4 532 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR9A2Q8NGT5 310 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 FKBP10Q96AY3 582 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 C5AR2Q9P296 337 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 PCDHGA9Q9Y5G4 932 aaKnown RBP12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 C17orf113A0A1B0GUU1 675 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 IFNA5P01569 189 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 CD27P26842 260 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 HTR6P50406 440 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 RAB11BQ15907 218 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 PAGE3Q5JUK9 113 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 UNQ6126/PRO20091Q6UXV3 157 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 FAM46BQ96A09 425 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 SLC6A17Q9H1V8 727 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 PARPBPQ9NWS1 579 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 SEC14L6B5MCN3 397 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 DDCP20711 480 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 GPX3P22352 226 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 ACOT4Q8N9L9 421 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 ANGPTL6Q8NI99 470 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 SLC6A18Q96N87 628 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 SEMA4CQ9C0C4 833 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 RIMS3Q9UJD0 308 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 HS3ST3A1Q9Y663 406 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 CACNG2Q9Y698 323 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 FAM230AA0A1W2PPH8 454 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 AMY2BP19961 511 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 INHBCP55103 352 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMEM52BQ4KMG9 183 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 UBE2UQ5VVX9 321 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 CNIH2Q6PI25 160 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 CDRT4Q8N9R6 151 aa12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 MEPEQ9NQ76 525 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF1-201ENST00000372189 NAP1L6A6NFF2 107 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 PRAF2O60831 178 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 CARD18P57730 90 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 APOFQ13790 326 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 GTPBP8Q8N3Z3 284 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR6Q1Q8NGQ2 317 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 NMNAT1Q9HAN9 279 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 CLEC4EQ9ULY5 219 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 ACOD1A6NK06 481 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 IGHEP01854 428 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 GPR4P46093 362 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR13C3Q8NGS6 347 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR2T35Q8NGX2 323 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 TMEM19Q96HH6 336 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 IER2Q9BTL4 223 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 OR11A1Q9GZK7 315 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 ENY2Q9NPA8 101 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 HEMK1Q9Y5R4 338 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 UBE2NP61088 152 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 RGNQ15493 299 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 PLAG1Q6DJT9 500 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 UBALD2Q8IYN6 164 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 PGBD5Q8N414 524 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 WDR20Q8TBZ3 569 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 PROKR1Q8TCW9 393 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 MYADMQ96S97 322 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 SUCNR1Q9BXA5 334 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 DCAF13Q9NV06 445 aaKnown RBP12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 SCRG1O75711 98 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 SULT1C4O75897 302 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 TFP02787 698 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 MAMDC2Q7Z304 686 aaPredicted RBP12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 CD163Q86VB7 1156 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 ST8SIA2Q92186 375 aa12.47□□□□□ -0.41
RAPGEF1-201ENST00000372189 TREX2Q9BQ50 279 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms