RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 STUB1Q9UNE7 303 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 SSR3Q9UNL2 185 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 PPIEQ9UNP9 301 aaKnown RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 IFT52Q9Y366 437 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 CLCA3PQ9Y6N3 262 aa9.54□□□□□ -0.88
COL5A1-202ENST00000371820 DIDO1Q9BTC0 2240 aaKnown RBP9.54□□□□□ -0.88
COL5A1-202ENST00000371820 LRBAP50851 2863 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SCN2AQ99250 2005 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 TRBV11-1A0A0K0K1C0 115 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 M0R082 166 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 CYR61O00622 381 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SNPHO15079 494 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 UGT2B17O75795 530 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 ZFAND5O76080 213 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SCG5P05408 212 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 LCKP06239 509 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 KLK1P06870 262 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 H1F0P07305 194 aaKnown RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 STSP08842 583 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 TNNI3P19429 210 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 ENDOUP21128 410 aaKnown RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 S100A1P23297 94 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 GADD45AP24522 165 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 PTBP1P26599 531 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 CD96P40200 585 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 FRKP42685 505 aaPredicted RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 PCYT1AP49585 367 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 TDGF1P3P51864 188 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 CASP6P55212 293 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 MLF1P58340 268 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 NCS1P62166 190 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 LSM3P62310 102 aaKnown RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 C1QL3Q5VWW1 255 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SLX4IPQ5VYV7 408 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SAXO2Q658L1 398 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 ZNF324BQ6AW86 544 aaPredicted RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 OR4C11Q6IEV9 310 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SLC25A25Q6KCM7 469 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 HSDL2Q6YN16 418 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 LYSMD2Q8IV50 215 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 GPALPP1Q8IXQ4 340 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 ARMC10Q8N2F6 343 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 TMEM156Q8N614 296 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 POC5Q8NA72 575 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 POGLUT1Q8NBL1 392 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 MORN4Q8NDC4 146 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SGCDQ92629 289 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SCMH1Q96GD3 660 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 ART5Q96L15 291 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 DHRS1Q96LJ7 313 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 TAAR6Q96RI8 345 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 PELOQ9BRX2 385 aaKnown RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 EVA1AQ9H8M9 152 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SLC25A19Q9HC21 320 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 RYDENQ9NUL5 291 aaKnown RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 LYARQ9NX58 379 aaKnown RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 ZNF226Q9NYT6 803 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 P2RX2Q9UBL9 471 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 COPS7AQ9UBW8 275 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SEC14L3Q9UDX4 400 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 FBXW2Q9UKT8 454 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 OSGIN2Q9Y236 505 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SLC9A8Q9Y2E8 581 aa9.53□□□□□ -0.88
COL5A1-202ENST00000371820 KLF13Q9Y2Y9 288 aaPredicted RBP9.53□□□□□ -0.88
COL5A1-202ENST00000371820 SVILO95425 2214 aa9.52□□□□□ -0.88
COL5A1-202ENST00000371820 A0A0G2JPF8 293 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 HNRNPCL2B2RXH8 293 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 HNRNPCL3B7ZW38 293 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 RTCAO00442 366 aaKnown RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 PDPK1O15530 556 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 LRRTM2O43300 516 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 GCM2O75603 506 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SLC25A12O75746 678 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 AGR2O95994 175 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SP1P08047 785 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 HNRNPCL4P0DMR1 293 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 ADORA3P0DMS8 318 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 GAAP10253 952 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 DBTP11182 482 aaKnown RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 NR4A1P22736 598 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 TRHRP34981 398 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SOAT1P35610 550 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 LIPAP38571 399 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SLC15A1P46059 708 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 KCNJ5P48544 419 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 MAPK12P53778 367 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 TNFRSF17Q02223 184 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SLAMF1Q13291 335 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SMN1Q16637 294 aaKnown RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 KRTCAP3Q53RY4 240 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 ZNF544Q6NX49 715 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 TMEM64Q6YI46 380 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 ZNF793Q6ZN11 406 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 GALNTL5Q7Z4T8 443 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 AKAP14Q86UN6 197 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 NUDT13Q86X67 352 aa9.52□□□□□ -0.89
COL5A1-202ENST00000371820 CCDC71Q8IV32 467 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SAMD14Q8IZD0 417 aaPredicted RBP9.52□□□□□ -0.89
COL5A1-202ENST00000371820 SLC34A3Q8N130 599 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms