RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 FAM183AA6NL82 134 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 EEF1E1-BLOC1S5C9J1V9 151 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 H7C417 338 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 NUDT21O43809 227 aaKnown RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 NOVA1P51513 510 aaKnown RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 CXCR4P61073 352 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 FRMPD2BQ6IN97 320 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 DDX31Q9H8H2 851 aaKnown RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 LYRM4Q9HD34 91 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 ABRACLQ9P1F3 81 aa13.71□□□□□ -0.21
NDC1-201ENST00000371429 NOSIPQ9Y314 301 aaKnown RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 ARID1BQ8NFD5 2236 aaPredicted RBP13.71□□□□□ -0.21
NDC1-201ENST00000371429 LRIT2A6NDA9 550 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 GNAO1P09471 354 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 GABRG2P18507 467 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 EIF1P41567 113 aaKnown RBP13.71□□□□□ -0.22
NDC1-201ENST00000371429 CLDN17P56750 224 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 PGGHGQ32M88 737 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 ZNF750Q32MQ0 723 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 ZNF322Q6U7Q0 402 aaPredicted RBP13.71□□□□□ -0.22
NDC1-201ENST00000371429 UCKL1Q9NWZ5 548 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 ETAA1Q9NY74 926 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 REV1Q9UBZ9 1251 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 MUTYHQ9UIF7 546 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 FAM230AA0A1W2PPH8 454 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 IDSB3KWA1 339 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 PEX14O75381 377 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 RAC2P15153 192 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 ST6GAL1P15907 406 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 GLB1P16278 677 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 SNTB2Q13425 540 aaKnown RBP13.71□□□□□ -0.22
NDC1-201ENST00000371429 PDE7AQ13946 482 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 SELPLGQ14242 412 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 HES5Q5TA89 166 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 DPY19L2P1Q6NXN4 242 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 ZNF417Q8TAU3 575 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 ZNF566Q969W8 418 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 VN1R3Q9BXE9 311 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 C20orf27Q9GZN8 174 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 NT5DC2Q9H857 520 aa13.71□□□□□ -0.22
NDC1-201ENST00000371429 UBE2J1Q9Y385 318 aaPredicted RBP13.71□□□□□ -0.22
NDC1-201ENST00000371429 PLPP1O14494 284 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 RAB3AP20336 220 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 ARNTP27540 789 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 DLSTP36957 453 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 CARD18P57730 90 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 MAB21L1Q13394 359 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 KEAP1Q14145 624 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 AGBL4Q5VU57 503 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 SLC6A19Q695T7 634 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 FAM109BQ6ICB4 259 aaPredicted RBP13.7□□□□□ -0.22
NDC1-201ENST00000371429 NIPAL3Q6P499 406 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 OR51T1Q8NGJ9 327 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 OR5W2Q8NH69 310 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 ELP4Q96EB1 424 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 CRISPLD2Q9H0B8 497 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 T-ENOLP0DO92 83 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 IFNGR1P15260 489 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 CDK5R2Q13319 367 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 CHTF18Q8WVB6 975 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 UCN3Q969E3 161 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 OBP2BQ9NPH6 170 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 LOXL2Q9Y4K0 774 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 TRAV18A0A075B6X5 111 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 TMED7-TICAM2A0A0A6YYA0 188 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 DENRO43583 198 aaKnown RBP13.7□□□□□ -0.22
NDC1-201ENST00000371429 PSMB10P40306 273 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 ACVR1Q04771 509 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 ASRGL1Q7L266 308 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 RNF113BQ8IZP6 322 aaKnown RBP13.7□□□□□ -0.22
NDC1-201ENST00000371429 SIRT6Q8N6T7 355 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 SLC29A1Q99808 456 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 ZNF350Q9GZX5 532 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 ZNF224Q9NZL3 707 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 NUP50Q9UKX7 468 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 HHLA2Q9UM44 414 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 DAPP1Q9UN19 280 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 TMED7Q9Y3B3 224 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 SSC5DA1L4H1 1573 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 TMEM269A0A1B0GVZ9 245 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 ARGFXA6NJG6 315 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 CNOT4O95628 575 aaKnown RBP13.7□□□□□ -0.22
NDC1-201ENST00000371429 S100A9P06702 114 aaKnown RBP13.7□□□□□ -0.22
NDC1-201ENST00000371429 CAPZBP47756 277 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 GNMTQ14749 295 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 ARSKQ6UWY0 536 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 TECPR1Q7Z6L1 1165 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 OR13C2Q8NGS9 318 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 CALHM2Q9HA72 323 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 KLHL13Q9P2N7 655 aa13.7□□□□□ -0.22
NDC1-201ENST00000371429 NARSO43776 548 aaKnown RBP13.69□□□□□ -0.22
NDC1-201ENST00000371429 CTSLP07711 333 aa13.69□□□□□ -0.22
NDC1-201ENST00000371429 PLAG1Q6DJT9 500 aa13.69□□□□□ -0.22
NDC1-201ENST00000371429 ETFBKMTQ8IXQ9 262 aa13.69□□□□□ -0.22
NDC1-201ENST00000371429 ELMOD2Q8IZ81 293 aa13.69□□□□□ -0.22
NDC1-201ENST00000371429 MS4A6EQ96DS6 147 aa13.69□□□□□ -0.22
NDC1-201ENST00000371429 RPP25Q9BUL9 199 aaKnown RBP13.69□□□□□ -0.22
NDC1-201ENST00000371429 ABCG5Q9H222 651 aa13.69□□□□□ -0.22
NDC1-201ENST00000371429 RAB9BQ9NP90 201 aa13.69□□□□□ -0.22
NDC1-201ENST00000371429 KLHL9Q9P2J3 617 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms