RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 HNRNPKP61978 463 aaKnown RBP eCLIP11.83□□□□□ -0.526e-7■■□□□ 12.9
GPC3-201ENST00000370818 ZMYND11Q15326 602 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 GRK1Q15835 563 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 FLYWCH1Q4VC44 716 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 NKAIN2Q5VXU1 208 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 NRMQ8IXM6 262 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 SPEM1Q8N4L4 309 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 POGLUT1Q8NBL1 392 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 DUSP18Q8NEJ0 188 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 PIGXQ8TBF5 258 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 AKAP1Q92667 903 aaKnown RBP eCLIP11.83□□□□□ -0.527e-9■■□□□ 13.8
GPC3-201ENST00000370818 FBXW5Q969U6 566 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 LRR1Q96L50 414 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 TSSK6Q9BXA6 273 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 HEXA-AS1Q9H8Q6 139 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 CACYBPQ9HB71 228 aaKnown RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 EXOSC4Q9NPD3 245 aaKnown RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 TMEM184BQ9Y519 407 aaPredicted RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 RPS10-NUDT3A0A1W2PQS6 291 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 HYKKA2RU49 373 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 PPM1BO75688 479 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 NSA2O95478 260 aaKnown RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 CLEC2LP0C7M8 214 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 FAM157BP0CG42 384 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 PTNP21246 168 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 FPR3P25089 353 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 GPR4P46093 362 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 FNTBP49356 437 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 EMDP50402 254 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 ZNF155Q12901 538 aaPredicted RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 ANGPT1Q15389 498 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 MEDAGQ5VYS4 303 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 ZC3H14Q6PJT7 736 aaKnown RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 MBOAT2Q6ZWT7 520 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 RRM2BQ7LG56 351 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 PHC2Q8IXK0 858 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 WDR36Q8NI36 951 aaKnown RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 SHDQ96IW2 340 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 KLHL15Q96M94 604 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 LSM2Q9Y333 95 aaKnown RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 RPL36Q9Y3U8 105 aaKnown RBP11.83□□□□□ -0.52
GPC3-201ENST00000370818 CLCA3PQ9Y6N3 262 aa11.83□□□□□ -0.52
GPC3-201ENST00000370818 IQCMA0A1B0GVH7 501 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 TLCD2A6NGC4 264 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 FABP7O15540 132 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 CTNSO60931 367 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 AK1P00568 194 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 SSTR4P31391 388 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 MAP2K3P46734 347 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 BTG2P78543 158 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 IGLV3-21P80748 117 aaPredicted RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 RUNX1T1Q06455 604 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 MRPL28Q13084 256 aaKnown RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 NCF4Q15080 339 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 SNAPC1Q16533 368 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 C14orf28Q4W4Y0 310 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 SLC27A4Q6P1M0 643 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 OR4N2Q8NGD1 307 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 TEX47Q8TBZ9 253 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 RIT1Q92963 219 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 ZC3HAV1LQ96H79 300 aaKnown RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 ZNF582Q96NG8 517 aaPredicted RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 SCPEP1Q9HB40 452 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 CAPN10Q9HC96 672 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 GALNT9Q9HCQ5 603 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 PLCL2Q9UPR0 1127 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 DTX4Q9Y2E6 619 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 CDC42EP2O14613 210 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 PIAS2O75928 621 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 IGKV1D-16P01601 117 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 RAF1P04049 648 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 GNSP15586 552 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 STX4Q12846 297 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 BTN1A1Q13410 526 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 CLEC12AQ5QGZ9 265 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 RANBP3LQ86VV4 465 aaPredicted RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 ADGRG3Q86Y34 549 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 LURAP1LQ8IV03 231 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 METTL27Q8N6F8 245 aaPredicted RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 ARSGQ96EG1 525 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 RBM18Q96H35 190 aaKnown RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 DIRAS2Q96HU8 199 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 VSTM2LQ96N03 204 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 NELL2Q99435 816 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 LMF2Q9BU23 707 aaKnown RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 SPRTNQ9H040 489 aaPredicted RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 HHATLQ9HCP6 504 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 RBFOX1Q9NWB1 397 aaKnown RBP11.82□□□□□ -0.52
GPC3-201ENST00000370818 SOHLH2Q9NX45 425 aa11.82□□□□□ -0.52
GPC3-201ENST00000370818 LYPD3O95274 346 aa11.81□□□□□ -0.52
GPC3-201ENST00000370818 TSPAN19P0C672 248 aa11.81□□□□□ -0.52
GPC3-201ENST00000370818 ARSBP15848 533 aa11.81□□□□□ -0.52
GPC3-201ENST00000370818 MAOAP21397 527 aa11.81□□□□□ -0.52
GPC3-201ENST00000370818 MAP2K6P52564 334 aa11.81□□□□□ -0.52
GPC3-201ENST00000370818 GAS1P54826 345 aa11.81□□□□□ -0.52
GPC3-201ENST00000370818 SKP1P63208 163 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms