RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 DIRAS3O95661 229 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 OPRD1P41143 372 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 XCR1P46094 333 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 POU3F4P49335 361 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 NR0B1P51843 470 aaKnown RBP14.88□□□□□ -0.03
COL17A1-202ENST00000369733 PDX1P52945 283 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SQSTM1Q13501 440 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 AKR1C8PQ5T2L2 129 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 MBOAT2Q6ZWT7 520 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SPNS2Q8IVW8 549 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 TSACCQ96A04 125 aaPredicted RBP14.88□□□□□ -0.03
COL17A1-202ENST00000369733 TARM1B6A8C7 271 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 TGM5O43548 720 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 CR2P20023 1033 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 TPMTP51580 245 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 OTUD1Q5VV17 481 aaPredicted RBP14.88□□□□□ -0.03
COL17A1-202ENST00000369733 VRK3Q8IV63 474 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SGPP2Q8IWX5 399 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 PXT1Q8NFP0 134 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 CAPNS2Q96L46 248 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 ZFYVE21Q9BQ24 234 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 ST6GALNAC5Q9BVH7 336 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 KCMF1Q9P0J7 381 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 SLC35A3Q9Y2D2 325 aa14.88□□□□□ -0.03
COL17A1-202ENST00000369733 TMEM82A0PJX8 343 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 TRABD2BA6NFA1 517 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 OR52A4PA6NMU1 304 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 GJA5P36382 358 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 C14orf28Q4W4Y0 310 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 BTLAQ7Z6A9 289 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 TMEM156Q8N614 296 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 OR52N1Q8NH53 320 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 NEURL3Q96EH8 262 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 SAMD11Q96NU1 681 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 SYT3Q9BQG1 590 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 SLC38A1Q9H2H9 487 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 NDUFB11Q9NX14 153 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 B4DXG7 233 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 RFXAPO00287 272 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 KCNJ13O60928 360 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ETV5P41161 510 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 KIAA1024LP59773 190 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 SIRPAP78324 504 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ZNF169Q14929 603 aaPredicted RBP14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ZNF679Q8IYX0 411 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 DAZLQ92904 295 aaKnown RBP14.87□□□□□ -0.03
COL17A1-202ENST00000369733 IKZF5Q9H5V7 419 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ZNF385DQ9H6B1 395 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 DKKL1Q9UK85 242 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 HOXC11O43248 304 aaPredicted RBP14.87□□□□□ -0.03
COL17A1-202ENST00000369733 GAB1Q13480 694 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 CST6Q15828 149 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 RAB11FIP2Q7L804 512 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 TSTD1Q8NFU3 115 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 MICU1Q9BPX6 476 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 LINC00597Q9H2U6 94 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ZNF442Q9H7R0 627 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 PRMT8Q9NR22 394 aaPredicted RBP14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ACER3Q9NUN7 267 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ALKBH4Q9NXW9 302 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ALDH3B1P43353 468 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ZNF84P51523 738 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 PEA15Q15121 130 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 SAXO2Q658L1 398 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 C16orf58Q96GQ5 468 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 P2RY12Q9H244 342 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 SLAMF7Q9NQ25 335 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 CYP8B1Q9UNU6 501 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 GPR34Q9UPC5 381 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 ZNF337Q9Y3M9 751 aa14.87□□□□□ -0.03
COL17A1-202ENST00000369733 NPIPA2E9PIF3 369 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 NPIPA3F8WFD2 350 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 LDB3O75112 727 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 EOGTQ5NDL2 527 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 RNF113BQ8IZP6 322 aaKnown RBP14.86□□□□□ -0.03
COL17A1-202ENST00000369733 CPXM2Q8N436 756 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 FOXJ1Q92949 421 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 LRFN1Q9P244 771 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 ASB1Q9Y576 335 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 TOR1AO14656 332 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 HEXBP07686 556 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 RAB3AP20336 220 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 CHATP28329 748 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 CRABP1P29762 137 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 CAV2P51636 162 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 RFLNAQ6ZTI6 216 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 CHTF18Q8WVB6 975 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 TOMM40LQ969M1 308 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 PPP4R1LQ9P1A2 415 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 KCNS2Q9ULS6 477 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 MYO10Q9HD67 2058 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 BPNT1O95861 308 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 PFN3P60673 137 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 RSU1Q15404 277 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 SYT14P1Q58G82 188 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 PARS2Q7L3T8 475 aaKnown RBP14.86□□□□□ -0.03
COL17A1-202ENST00000369733 PRICKLE2Q7Z3G6 844 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 FNDC9Q8TBE3 224 aa14.86□□□□□ -0.03
COL17A1-202ENST00000369733 THAP3Q8WTV1 239 aaPredicted RBP14.86□□□□□ -0.03
COL17A1-202ENST00000369733 RHNO1Q9BSD3 238 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms